RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 DEFB118Q96PH6 123 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 TMEM237Q96Q45 408 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 CNOT6Q9ULM6 557 aaKnown RBP18.68■□□□□ 0.58
SHANK3-202ENST00000414786 SPEF1Q9Y4P9 236 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 SP140Q13342 867 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 ZNF846Q147U1 533 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 FBXO15Q8NCQ5 510 aaPredicted RBP18.68■□□□□ 0.58
SHANK3-202ENST00000414786 MTA3Q9BTC8 594 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 EIF3HO15372 352 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■■□□□ 13
SHANK3-202ENST00000414786 RLN1P04808 185 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 TRIM40Q6P9F5 258 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 CLVS1Q8IUQ0 354 aaPredicted RBP18.68■□□□□ 0.58
SHANK3-202ENST00000414786 ZNF366Q8N895 744 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 RORBQ92753 470 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 ZNF558Q96NG5 402 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 SPATC1LQ9H0A9 340 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 REEP1Q9H902 201 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 GMEB2Q9UKD1 530 aa18.68■□□□□ 0.58
SHANK3-202ENST00000414786 A0A1W2PQC6 194 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 HYKKA2RU49 373 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 TTC34A8MYJ7 566 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 C1QTNF3-AMACRE9PGA6 284 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 NFE2Q16621 373 aaPredicted RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 TAS1R2Q8TE23 839 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 MCCD1P59942 119 aaPredicted RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 CHAF1BQ13112 559 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 TMED8Q6PL24 325 aaPredicted RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 UBE2R2Q712K3 238 aaPredicted RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 DHFR2Q86XF0 187 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 OR4A15Q8NGL6 344 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 OR14C36Q8NHC7 312 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 FAM126AQ9BYI3 521 aaPredicted RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 TLE6Q9H808 572 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 ANKEF1Q9NU02 776 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 PLGP00747 810 aaPredicted RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 DLG1Q12959 904 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 PAGE2BQ5JRK9 111 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 PPP1R15BQ5SWA1 713 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 ADSSL1Q8N142 457 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 ZNF433Q8N7K0 673 aaPredicted RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 ARNTL2Q8WYA1 636 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 ZBTB45Q96K62 511 aaPredicted RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 PTPN18Q99952 460 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 CROTQ9UKG9 612 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 TBC1D24Q9ULP9 559 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 PTPN11Q06124 597 aaPredicted RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 KRR1Q13601 381 aaKnown RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 USP38Q8NB14 1042 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 APOL4Q9BPW4 351 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 PSME2Q9UL46 239 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 OR10H3O60404 316 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 MAGP20916 626 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 ACVR2BQ13705 512 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 ZC3H12AQ5D1E8 599 aaKnown RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 FAM151BQ6UXP7 276 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 ZCCHC7Q8N3Z6 543 aaKnown RBP18.67■□□□□ 0.58
SHANK3-202ENST00000414786 LMAN2LQ9H0V9 348 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 TMEM253P0C7T8 217 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 FUT4P22083 530 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 METTL21AQ8WXB1 218 aa18.67■□□□□ 0.58
SHANK3-202ENST00000414786 FBXO21O94952 628 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 NFIAQ12857 509 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 CCDC153Q494R4 210 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 CXorf57Q6NSI4 855 aaKnown RBP18.66■□□□□ 0.58
SHANK3-202ENST00000414786 ZNF677Q86XU0 584 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 C7orf57Q8NEG2 295 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 TSEN15Q8WW01 171 aaKnown RBP18.66■□□□□ 0.58
SHANK3-202ENST00000414786 CAPSLQ8WWF8 208 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 SPATA9Q9BWV2 254 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 OSBPL3Q9H4L5 887 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 EPHB6O15197 1021 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 GNALP38405 381 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 HERVK_113P62684 666 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 ERVK-9P63128 1117 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 DNAJB14Q8TBM8 379 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 DPEP2Q9H4A9 486 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 ERVK-11Q9UQG0 969 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 USP42Q9H9J4 1324 aaKnown RBP18.66■□□□□ 0.58
SHANK3-202ENST00000414786 A8MU76 341 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 ZNF879B4DU55 563 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 RNASEH2AO75792 299 aaKnown RBP18.66■□□□□ 0.58
SHANK3-202ENST00000414786 ETS1P14921 441 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 FNBP1LQ5T0N5 605 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 LIN54Q6MZP7 749 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 PANX3Q96QZ0 392 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 NKIRAS2Q9NYR9 191 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 SYNPO2Q9UMS6 1093 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 PLEKHG2Q9H7P9 1386 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 NT5EP21589 574 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 CCND1P24385 295 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 PGDP52209 483 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 NRG1Q02297 640 aaPredicted RBP18.66■□□□□ 0.58
SHANK3-202ENST00000414786 MTA1Q13330 715 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 NR1I3Q14994 352 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 OFCC1Q8IZS5 231 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 KAT5Q92993 513 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 FAM192AQ9GZU8 254 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 A0A087X0B3 334 aa18.66■□□□□ 0.58
SHANK3-202ENST00000414786 SIN3BO75182 1162 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms