RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 JUNP05412 331 aaKnown RBP9.3□□□□□ -0.92
CAPN3-206ENST00000397163 LCP1P13796 627 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 PGGT1BP53609 377 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 C21orf59P57076 290 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 SNX16P57768 344 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 PSME3P61289 254 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 RBP5P82980 135 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 GNA12Q03113 381 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 GLRA4Q5JXX5 417 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 GK5Q6ZS86 529 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 ZNF567Q8N184 647 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 CCNYL1Q8N7R7 359 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 CNTD1Q8N815 330 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 MTMR14Q8NCE2 650 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 ZNF280CQ8ND82 737 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 ACVR1CQ8NER5 493 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 GABPB2Q8TAK5 448 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-206ENST00000397163 ISL2Q96A47 359 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 PPWD1Q96BP3 646 aaKnown RBP9.3□□□□□ -0.92
CAPN3-206ENST00000397163 C12orf43Q96C57 262 aaKnown RBP9.3□□□□□ -0.92
CAPN3-206ENST00000397163 MFSD3Q96ES6 412 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 PLEKHA8Q96JA3 519 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 VPS50Q96JG6 964 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 SNX27Q96L92 541 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 TEPSINQ96N21 525 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 VRTNQ9H8Y1 702 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 PNPLA3Q9NST1 481 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 COX16Q9P0S2 106 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 CNOT11Q9UKZ1 510 aaKnown RBP9.3□□□□□ -0.92
CAPN3-206ENST00000397163 VANGL2Q9ULK5 521 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 FIS1Q9Y3D6 152 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 COPG1Q9Y678 874 aaKnown RBP9.3□□□□□ -0.92
CAPN3-206ENST00000397163 H3BNH8 94 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 PHGDHO43175 533 aaKnown RBP9.29□□□□□ -0.92
CAPN3-206ENST00000397163 ATE1O95260 518 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 UGT1A6P19224 532 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 UGT1A1P22309 533 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 UGT1A4P22310 534 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 ADSLP30566 484 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-206ENST00000397163 UGT1A3P35503 534 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 UGT1A5P35504 534 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 PTPN9P43378 593 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 ALDH3B2P48448 385 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 TXNL4AP83876 142 aaKnown RBP9.29□□□□□ -0.92
CAPN3-206ENST00000397163 KIZQ2M2Z5 673 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 EML3Q32P44 896 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 LDLRAP1Q5SW96 308 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 ZYG11AQ6WRX3 759 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 CLEC14AQ86T13 490 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 SNX29P2Q8IUI4 249 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 CROCCP3Q8IVE0 287 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 DDHD1Q8NEL9 900 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 CXorf38Q8TB03 319 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 ISOC1Q96CN7 298 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 VPS39Q96JC1 886 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 ZNF597Q96LX8 424 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 RANBP9Q96S59 729 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 MPHOSPH6Q99547 160 aaKnown RBP9.29□□□□□ -0.92
CAPN3-206ENST00000397163 CIB1Q99828 191 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 PRDM12Q9H4Q4 367 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 SIAEQ9HAT2 523 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 MYOZ2Q9NPC6 264 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 IARS2Q9NSE4 1012 aaKnown RBP9.29□□□□□ -0.92
CAPN3-206ENST00000397163 VTI1BQ9UEU0 232 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 SQORQ9Y6N5 450 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 ZNF646O15015 1829 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-206ENST00000397163 DYTNA2CJ06 578 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 CCDC78A2IDD5 438 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 TCAF2A6NFQ2 919 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 KCNU1A8MYU2 1149 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 SLCO1B7G3V0H7 640 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 GAS2O43903 313 aaKnown RBP9.29□□□□□ -0.92
CAPN3-206ENST00000397163 GABBR2O75899 941 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 CAPNS1P04632 268 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 APOA4P06727 396 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 NR4A1P22736 598 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 AVPR1AP37288 418 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 ESRRGP62508 458 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 CREB5Q02930 508 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 MBTD1Q05BQ5 628 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 TNFAIP1Q13829 316 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 RFTN1Q14699 578 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-206ENST00000397163 GPR162Q16538 588 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 LY6KQ17RY6 165 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 SLC10A6Q3KNW5 377 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 MTX3Q5HYI7 312 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 CYP2R1Q6VVX0 501 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 AGBL3Q8NEM8 1001 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 SLC35F5Q8WV83 523 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 ASB9Q96DX5 294 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 APOL2Q9BQE5 337 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 NAA50Q9GZZ1 169 aaKnown RBP9.29□□□□□ -0.92
CAPN3-206ENST00000397163 TPK1Q9H3S4 243 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 AS3MTQ9HBK9 375 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 ZFYVE28Q9HCC9 887 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 DPP3Q9NY33 737 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 RUVBL2Q9Y230 463 aaKnown RBP9.29□□□□□ -0.92
CAPN3-206ENST00000397163 A0A1W2PQ67 120 aa9.29□□□□□ -0.92
CAPN3-206ENST00000397163 GIPC1O14908 333 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms