RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 DNMT3LQ9UJW3 386 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 MAGEA13PA6NCF6 341 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 GIMD1P0DJR0 217 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 ANTXR2P58335 489 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 DNAJB14Q8TBM8 379 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 VPS35Q96QK1 796 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 RECQL4O94761 1208 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 ARMC3Q5W041 872 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 KBTBD2Q8IY47 623 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 ZNF558Q96NG5 402 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 WRAP53Q9BUR4 548 aaKnown RBP16.5■□□□□ 0.23
RGP1-201ENST00000378078 OSBPL2Q9H1P3 480 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 KCNN2Q9H2S1 579 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 CHMP1AQ9HD42 196 aaPredicted RBP16.5■□□□□ 0.23
RGP1-201ENST00000378078 E5RJQ4 531 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 GAS2O43903 313 aaKnown RBP16.5■□□□□ 0.23
RGP1-201ENST00000378078 PRMT3O60678 531 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 MAT2AP31153 395 aaKnown RBP16.5■□□□□ 0.23
RGP1-201ENST00000378078 HIPK1Q86Z02 1210 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 KAT2AQ92830 837 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 DEFB118Q96PH6 123 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 MAFFQ9ULX9 164 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 BTN3A3O00478 584 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 KPNA6O60684 536 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 OTOP2Q7RTS6 562 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 ALDH8A1Q9H2A2 487 aaPredicted RBP16.5■□□□□ 0.23
RGP1-201ENST00000378078 SEMA6BQ9H3T3 888 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 ATP5C1P36542 298 aaKnown RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 FNBP1LQ5T0N5 605 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 ARMCX6Q7L4S7 300 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 CLVS1Q8IUQ0 354 aaPredicted RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 OR52K1Q8NGK4 314 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 C1orf50Q9BV19 199 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 CLIC5Q9NZA1 410 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 SSU72P8A0A1W2PR75 194 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 DNTTP04053 509 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 TPP2P29144 1249 aaPredicted RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 LRPAP1P30533 357 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 ERVK-9P63128 1117 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 ERVK-24P63145 666 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 KCTD8Q6ZWB6 473 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 REPS2Q8NFH8 660 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 TECPR2O15040 1411 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 A0A096LPK6 155 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 CLPTM1O96005 669 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 CCNA2P20248 432 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 PPP2R2BQ00005 443 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 SF1Q15637 639 aaKnown RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 ZNF280BQ86YH2 543 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 C12orf50Q8NA57 414 aaPredicted RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 CLHC1Q8NHS4 586 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 QKIQ96PU8 341 aaKnown RBP eCLIP16.49■□□□□ 0.23
RGP1-201ENST00000378078 APOL4Q9BPW4 351 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 EPHB6O15197 1021 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 DCXO43602 365 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 CTSOP43234 321 aaPredicted RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 COL9A2Q14055 689 aaPredicted RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 APTXQ7Z2E3 356 aaKnown RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 ZNF248Q8NDW4 579 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 SLC5A5Q92911 643 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 MCMBPQ9BTE3 642 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 NMRAL1Q9HBL8 299 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 TRIM39Q9HCM9 518 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 COMMD9Q9P000 198 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 ECDO95905 644 aaPredicted RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 MASP1P48740 699 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 MAD2L1Q13257 205 aaPredicted RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 TBC1D25Q3MII6 688 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 ANKS1BQ7Z6G8 1248 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 TXNRD3Q86VQ6 643 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 OR6Y1Q8NGX8 325 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 EEF1AKMT1Q8WVE0 214 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 WDR60Q8WVS4 1066 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 GNPTGQ9UJJ9 305 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 H3BMM5 538 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 SNRPD1P62314 119 aaKnown RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 SERPINB11Q96P15 392 aa16.49■□□□□ 0.23
RGP1-201ENST00000378078 CNOT6Q9ULM6 557 aaKnown RBP16.49■□□□□ 0.23
RGP1-201ENST00000378078 MANSC4A6NHS7 340 aaPredicted RBP16.48■□□□□ 0.23
RGP1-201ENST00000378078 OR7A10O76100 309 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 CCNG2Q16589 344 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 TMPRSS9Q7Z410 1059 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 ZNF34Q8IZ26 560 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 FAM129BQ96TA1 746 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 MLPHQ9BV36 600 aaPredicted RBP16.48■□□□□ 0.23
RGP1-201ENST00000378078 IDI2Q9BXS1 227 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 CEP44Q9C0F1 390 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 TPST2O60704 377 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 HOXC12P31275 282 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 SPANXN3Q5MJ09 141 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 FBXO42Q6P3S6 717 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 CD302Q8IX05 232 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 KBTBD7Q8WVZ9 684 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 GAL3ST3Q96A11 431 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 REEP1Q9H902 201 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 CPSF1Q10570 1443 aaKnown RBP16.48■□□□□ 0.23
RGP1-201ENST00000378078 PIK3CDO00329 1044 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 NCK1P16333 377 aa16.48■□□□□ 0.23
RGP1-201ENST00000378078 NRG1Q02297 640 aaPredicted RBP16.48■□□□□ 0.23
RGP1-201ENST00000378078 NFE2Q16621 373 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms