RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PSAT1Q9Y617 370 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 HTR3EA5X5Y0 456 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 E2F6O75461 281 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 CSPG5O95196 566 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 STAMBPO95630 424 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 PFKMP08237 780 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 GPD2P43304 727 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 ACADVLP49748 655 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 PRKCZQ05513 592 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 GDF6Q6KF10 455 aaPredicted RBP13.12□□□□□ -0.31
MSH5-204ENST00000375755 TRNP1Q6NT89 227 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 ALKAL1Q6UXT8 129 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 DCDC5Q6ZRR9 648 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 TNS4Q8IZW8 715 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 FIBCD1Q8N539 461 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 MCUQ8NE86 351 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 ATP2A3Q93084 1043 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 PPP1R10Q96QC0 940 aaKnown RBP13.12□□□□□ -0.31
MSH5-204ENST00000375755 BRD8Q9H0E9 1235 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 ARMC7Q9H6L4 198 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 BCAP29Q9UHQ4 241 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 CDC14AQ9UNH5 594 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 CDY2AQ9Y6F7 541 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 PSMD12O00232 456 aaPredicted RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 NEMP1O14524 444 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 ENDOD1O94919 500 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 HSPA4LO95757 839 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 ELNP15502 786 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 LMO2P25791 158 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 ZBTB6Q15916 424 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 CCDC92Q53HC0 331 aaPredicted RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 METTL21CQ5VZV1 264 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 KRT80Q6KB66 452 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 TMEM53Q6P2H8 277 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 CYP4V2Q6ZWL3 525 aaPredicted RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 PLD5Q8N7P1 536 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 SMG8Q8ND04 991 aaKnown RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 ERLEC1Q96DZ1 483 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 SLC29A1Q99808 456 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 WDR41Q9HAD4 459 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 TSPAN16Q9UKR8 245 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 SMIM28A0A1B0GU29 152 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 MATN2O00339 956 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 PAX3P23760 479 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 TUBA4AP68366 448 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 CRADDP78560 199 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 SPIDRQ14159 915 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 DCAF4L1Q3SXM0 396 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 PGAM4Q8N0Y7 254 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 RNF169Q8NCN4 708 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 TRPC4APQ8TEL6 797 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 HNRNPABQ99729 332 aaKnown RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 OSBPL11Q9BXB4 747 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 PNPLA3Q9NST1 481 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 PDCD11Q14690 1871 aaKnown RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 WDR27A2RRH5 827 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 ATE1O95260 518 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 BMP10O95393 424 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 OCM2P0CE71 109 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 OCMP0CE72 109 aaPredicted RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 CCND3P30281 292 aaPredicted RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 ATICP31939 592 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 BCAP31P51572 246 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 YWHAEP62258 255 aaKnown RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 TFDP2Q14188 446 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 FAM47CQ5HY64 1035 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 C9orf57Q5W0N0 161 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 OGFOD2Q6N063 350 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 GPR141Q7Z602 305 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 PQLC3Q8N755 202 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 LRTOMTQ8WZ04 291 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 MOCOSQ96EN8 888 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 RNF157Q96PX1 679 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 NEURL2Q9BR09 285 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 VRTNQ9H8Y1 702 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 GPBP1L1Q9HC44 474 aaPredicted RBP13.11□□□□□ -0.31
MSH5-204ENST00000375755 ACSS2Q9NR19 701 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 IPPQ9Y573 584 aa13.11□□□□□ -0.31
MSH5-204ENST00000375755 GABBR2O75899 941 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 HMGCRP04035 888 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 AKR1A1P14550 325 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 GABRB3P28472 473 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 HMOX2P30519 316 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 PPARGP37231 505 aaPredicted RBP13.1□□□□□ -0.31
MSH5-204ENST00000375755 NIPAL4Q0D2K0 466 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 SOWAHAQ2M3V2 549 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 TTC30AQ86WT1 665 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 TDRD5Q8NAT2 981 aaKnown RBP13.1□□□□□ -0.31
MSH5-204ENST00000375755 RP9Q8TA86 221 aaKnown RBP13.1□□□□□ -0.31
MSH5-204ENST00000375755 LPPQ93052 612 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 PLEKHA8Q96JA3 519 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 CNDP1Q96KN2 507 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 B3GNT5Q9BYG0 378 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 VPS45Q9NRW7 570 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 RALGAPA2Q2PPJ7 1873 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms