RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 TBC1D14Q9P2M4 693 aa19.75■□□□□ 0.75
CHTOP-204ENST00000368694 C5orf42Q9H799 3197 aa19.75■□□□□ 0.75
CHTOP-204ENST00000368694 RGS16O15492 202 aaPredicted RBP19.74■□□□□ 0.75
CHTOP-204ENST00000368694 SPAG6O75602 509 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 FSHRP23945 695 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 GET4Q7L5D6 327 aaPredicted RBP19.74■□□□□ 0.75
CHTOP-204ENST00000368694 KDELC2Q7Z4H8 507 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 SH2D3CQ8N5H7 860 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 IMP4Q96G21 291 aaKnown RBP19.74■□□□□ 0.75
CHTOP-204ENST00000368694 FICDQ9BVA6 458 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 CASS4Q9NQ75 786 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 SYBUQ9NX95 663 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 BFARQ9NZS9 450 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 SEPT3Q9UH03 358 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 CDH22Q9UJ99 828 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 SZT2Q5T011 3432 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 TTC24A2A3L6 582 aaPredicted RBP19.74■□□□□ 0.75
CHTOP-204ENST00000368694 HMGB1P1B2RPK0 211 aaPredicted RBP19.74■□□□□ 0.75
CHTOP-204ENST00000368694 POC1B-GALNT4F8VUJ3 575 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 SNAP91O60641 907 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 PAPLNO95428 1278 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 TNK2Q07912 1038 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 CDH17Q12864 832 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 MPP3Q13368 585 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 FYB2Q5VWT5 728 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 LINGO4Q6UY18 593 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 TMEM25Q86YD3 366 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 KLHDC8BQ8IXV7 354 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 XPO6Q96QU8 1125 aaKnown RBP19.74■□□□□ 0.75
CHTOP-204ENST00000368694 TRIM56Q9BRZ2 755 aaKnown RBP19.74■□□□□ 0.75
CHTOP-204ENST00000368694 ZNF576Q9H609 170 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 RABGEF1Q9UJ41 708 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 WNT6Q9Y6F9 365 aa19.74■□□□□ 0.75
CHTOP-204ENST00000368694 TCRBV9S1A1TA0A576 114 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 NEDD8-MDP1E9PL57 170 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 AGTP01019 485 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 ARF5P84085 180 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 NIPAL4Q0D2K0 466 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 RFTN1Q14699 578 aaPredicted RBP19.73■□□□□ 0.75
CHTOP-204ENST00000368694 PRPF39Q86UA1 669 aaKnown RBP19.73■□□□□ 0.75
CHTOP-204ENST00000368694 NPAS3Q8IXF0 933 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 CELF5Q8N6W0 485 aaKnown RBP19.73■□□□□ 0.75
CHTOP-204ENST00000368694 EFHBQ8N7U6 833 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 MRRFQ96E11 262 aaKnown RBP19.73■□□□□ 0.75
CHTOP-204ENST00000368694 SEMA3CQ99985 751 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 BBS2Q9BXC9 721 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 LINC00597Q9H2U6 94 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 KIF9Q9HAQ2 790 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 CLEC4EQ9ULY5 219 aa19.73■□□□□ 0.75
CHTOP-204ENST00000368694 AP3B1O00203 1094 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 MUSKO15146 869 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 TCF3P15923 654 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 AGBL2Q5U5Z8 902 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 UNC5AQ6ZN44 842 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 GPR149Q86SP6 731 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 KIAA1522Q9P206 1035 aaPredicted RBP19.72■□□□□ 0.75
CHTOP-204ENST00000368694 CTNNAL1Q9UBT7 734 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 NOVA2Q9UNW9 492 aaKnown RBP19.72■□□□□ 0.75
CHTOP-204ENST00000368694 ATP9BO43861 1147 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 TCEA3O75764 348 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 STX2P32856 288 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 WNT3AP56704 352 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 LMAN2Q12907 356 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 EFTUD2Q15029 972 aaKnown RBP eCLIP19.72■□□□□ 0.751e-8■■■■□ 26.2
CHTOP-204ENST00000368694 APCDD1Q8J025 514 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 DCAF4L2Q8NA75 395 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 FIBINQ8TAL6 211 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 FGF13Q92913 245 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 IRF7Q92985 503 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 PGM2Q96G03 612 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 EXOC2Q96KP1 924 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 MRGPRX2Q96LB1 330 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 PSKH2Q96QS6 385 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 C2orf49Q9BVC5 232 aaPredicted RBP19.72■□□□□ 0.75
CHTOP-204ENST00000368694 ACSS3Q9H6R3 686 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 SPHK2Q9NRA0 654 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 VPS45Q9NRW7 570 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 TBK1Q9UHD2 729 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 VPS51Q9UID3 782 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 OR51B4Q9Y5P0 310 aa19.72■□□□□ 0.75
CHTOP-204ENST00000368694 SLC9A3R1O14745 358 aaPredicted RBP19.71■□□□□ 0.75
CHTOP-204ENST00000368694 CDH16O75309 829 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 GJB3O75712 270 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 PIAS1O75925 651 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 MMP2P08253 660 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 TPH1P17752 444 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 GYS2P54840 703 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 KLHL38Q2WGJ6 581 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 CERCAMQ5T4B2 595 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 ANKRD54Q6NXT1 300 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 TMEM184AQ6ZMB5 413 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 CCNJLQ8IV13 435 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 GSDMBQ8TAX9 411 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 ARRDC2Q8TBH0 407 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 OTUB2Q96DC9 234 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 MGME1Q9BQP7 344 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 NAT9Q9BTE0 207 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 PGAM1P18669 254 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 CD70P32970 193 aa19.71■□□□□ 0.75
CHTOP-204ENST00000368694 VIPR2P41587 438 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms