RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 SPATC1Q76KD6 591 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 OR13F1Q8NGS4 319 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 ASB9Q96DX5 294 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 DMRTB1Q96MA1 342 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 ALOXE3Q9BYJ1 711 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 APOBEC3GQ9HC16 384 aaKnown RBP16.44■□□□□ 0.22
MBD1-204ENST00000347968 HMG20AQ9NP66 347 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 DDX28Q9NUL7 540 aaKnown RBP16.44■□□□□ 0.22
MBD1-204ENST00000347968 GIMAP4Q9NUV9 329 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 ADAMTSL1Q8N6G6 1762 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 ASNA1O43681 348 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 LRCH4O75427 683 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 HLA-DRAP01903 254 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 BMP4P12644 408 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 PRELPP51888 382 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 TBCELQ5QJ74 424 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 CRTC3Q6UUV7 619 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 ZNF354CQ86Y25 554 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.44■□□□□ 0.22
MBD1-204ENST00000347968 BEND7Q8N7W2 519 aaPredicted RBP16.44■□□□□ 0.22
MBD1-204ENST00000347968 FNIP1Q8TF40 1166 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 OSCP1Q8WVF1 389 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 ADPRHL2Q9NX46 363 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 COPG1Q9Y678 874 aaKnown RBP16.44■□□□□ 0.22
MBD1-204ENST00000347968 DDX60LQ5H9U9 1706 aaKnown RBP16.43■□□□□ 0.22
MBD1-204ENST00000347968 IGLV3-22A0A075B6J6 115 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 GCATO75600 419 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 ATP6V1B2P21281 511 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 ACAP2Q15057 778 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 SH3PXD2AQ5TCZ1 1133 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 HCAR2Q8TDS4 363 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 CPB2Q96IY4 423 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 TCF12Q99081 682 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 TUFT1Q9NNX1 390 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 CCDC167Q9P0B6 97 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 PPP1R1BQ9UD71 204 aaPredicted RBP16.43■□□□□ 0.22
MBD1-204ENST00000347968 PCDHB12Q9Y5F1 795 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 ZHX2Q9Y6X8 837 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 C9JVG2 144 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 PSMD10O75832 226 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 GLRBP48167 497 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 PLA2G16P53816 162 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 SESN2P58004 480 aaPredicted RBP16.43■□□□□ 0.22
MBD1-204ENST00000347968 WDR44Q5JSH3 913 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 ABRAXAS1Q6UWZ7 409 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 SPERTQ8NA61 448 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 ZNF577Q9BSK1 485 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 EMILIN2Q9BXX0 1053 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 IRF2BPLQ9H1B7 796 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 GPATCH2LQ9NWQ4 482 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 COQ3Q9NZJ6 369 aa16.43■□□□□ 0.22
MBD1-204ENST00000347968 IPO11Q9UI26 975 aaKnown RBP16.43■□□□□ 0.22
MBD1-204ENST00000347968 IL7RP16871 459 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 MMP8P22894 467 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 CCNA1P78396 465 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 LTBP1Q14766 1721 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 CRY1Q16526 586 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 IMPG1Q17R60 797 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 SEZ6Q53EL9 994 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 CATSPEREQ5SY80 951 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 CDC42EP5Q6NZY7 148 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 SPPL2CQ8IUH8 684 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 GRAMD2AQ8IUY3 354 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 ZNF606Q8WXB4 792 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 GATA5Q9BWX5 397 aaPredicted RBP16.42■□□□□ 0.22
MBD1-204ENST00000347968 PLSCR3Q9NRY6 295 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 MKS1Q9NXB0 559 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 COQ4Q9Y3A0 265 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 MICAL3Q7RTP6 2002 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 FAM159BA6NKW6 160 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 FAM155AB1AL88 458 aaPredicted RBP16.42■□□□□ 0.22
MBD1-204ENST00000347968 KMOO15229 486 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 NUAK1O60285 661 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 PIGNO95427 931 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 NADKO95544 446 aaPredicted RBP16.42■□□□□ 0.22
MBD1-204ENST00000347968 ERVK-10P10266 1014 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 ARPP19P56211 112 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 OTUD3Q5T2D3 398 aaPredicted RBP16.42■□□□□ 0.22
MBD1-204ENST00000347968 TTC23LQ6PF05 361 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 PHF13Q86YI8 300 aaPredicted RBP16.42■□□□□ 0.22
MBD1-204ENST00000347968 ZUFSPQ96AP4 578 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 ZFYVE19Q96K21 471 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 FUNDC2Q9BWH2 189 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 PNPLA8Q9NP80 782 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 PTPRJQ12913 1337 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 SLC7A1P30825 629 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 NLRP11P59045 1033 aaKnown RBP16.42■□□□□ 0.22
MBD1-204ENST00000347968 MRPS15P82914 257 aaKnown RBP16.42■□□□□ 0.22
MBD1-204ENST00000347968 GCNT1Q02742 428 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 AP3B2Q13367 1082 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 GPATCH4Q5T3I0 446 aaKnown RBP16.42■□□□□ 0.22
MBD1-204ENST00000347968 CLSTN3Q9BQT9 956 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 ZDHHC2Q9UIJ5 367 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 NAV1Q8NEY1 1877 aa16.42■□□□□ 0.22
MBD1-204ENST00000347968 CDK2AP1O14519 115 aa16.41■□□□□ 0.22
MBD1-204ENST00000347968 METTL18O95568 372 aa16.41■□□□□ 0.22
MBD1-204ENST00000347968 TSHRP16473 764 aa16.41■□□□□ 0.22
MBD1-204ENST00000347968 ZNF135P52742 658 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms