RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PPHLN1Q8NEY8 458 aaKnown RBP18.62■□□□□ 0.57
CCDC43-201ENST00000315286 NSMCE1Q8WV22 266 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 ATP2A3Q93084 1043 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 ISL2Q96A47 359 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 RC3H2Q9HBD1 1191 aaKnown RBP18.62■□□□□ 0.57
CCDC43-201ENST00000315286 HSFX1Q9UBD0 423 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 TCAF1Q9Y4C2 921 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 YIPF1Q9Y548 306 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 BPTFQ12830 3046 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 CHD5Q8TDI0 1954 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 CCDC195A0A1B0GUA6 201 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 E2F8A0AVK6 867 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 BIRC5O15392 142 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 DNAJC8O75937 253 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-201ENST00000315286 ALDH3A1P30838 453 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 ETFBP38117 255 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 MAGEA12P43365 314 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 ALDH1A3P47895 512 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 TMPRSS15P98073 1019 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 CCDC15Q0P6D6 951 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 BST1Q10588 318 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 BTG3Q14201 252 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-201ENST00000315286 KLHDC10Q6PID8 442 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 DENND1CQ8IV53 801 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 CNPY4Q8N129 248 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 SLC25A41Q8N5S1 370 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 ZNF333Q96JL9 665 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 MYRFLQ96LU7 910 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 TRIM55Q9BYV6 548 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 GKN1Q9NS71 199 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 TRPM5Q9NZQ8 1165 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 SLC2A6Q9UGQ3 507 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 VAPBO95292 243 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 IL1BP01584 269 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 KLKB1P03952 638 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 PRKCGP05129 697 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 CSF2RAP15509 400 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 SLC11A2P49281 568 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 SERPINB8P50452 374 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 CSE1LP55060 971 aaKnown RBP18.61■□□□□ 0.57
CCDC43-201ENST00000315286 LRRC26Q2I0M4 334 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ACVR1CQ8NER5 493 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ZNF398Q8TD17 642 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 AUTS2Q8WXX7 1259 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 RNF38Q9H0F5 515 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 MYLK2Q9H1R3 596 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ZNF395Q9H8N7 513 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-201ENST00000315286 CAB39LQ9H9S4 337 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ARNT2Q9HBZ2 717 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ATP13A1Q9HD20 1204 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 TMEM216Q9P0N5 145 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ZFP37Q9Y6Q3 630 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-201ENST00000315286 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ANAPC1Q9H1A4 1944 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 A0A0D9SEW6 157 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 PLIN3O60664 434 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 TGDSO95455 350 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ARNTP27540 789 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ARCN1P48444 511 aaKnown RBP18.61■□□□□ 0.57
CCDC43-201ENST00000315286 TNK2Q07912 1038 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 PLD1Q13393 1074 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 LBRQ14739 615 aaKnown RBP18.61■□□□□ 0.57
CCDC43-201ENST00000315286 CNGA3Q16281 694 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 TAF12Q16514 161 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 INSCQ1MX18 579 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 FBXW10Q5XX13 1052 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ATG16L1Q676U5 607 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ARRDC2Q8TBH0 407 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 PTCD2Q8WV60 388 aaKnown RBP18.61■□□□□ 0.57
CCDC43-201ENST00000315286 VPS39Q96JC1 886 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 LRRC37BQ96QE4 947 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 HERC2P3Q9BVR0 1158 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 MRM3Q9HC36 420 aaKnown RBP18.61■□□□□ 0.57
CCDC43-201ENST00000315286 VPS45Q9NRW7 570 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 ZNF358Q9NW07 568 aa18.61■□□□□ 0.57
CCDC43-201ENST00000315286 TIMM44O43615 452 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 PRAMEF11O60813 436 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 STC2O76061 302 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 RPS24P62847 133 aaKnown RBP18.6■□□□□ 0.57
CCDC43-201ENST00000315286 SETDB1Q15047 1291 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 DLG2Q15700 870 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 FASTKD1Q53R41 847 aaKnown RBP18.6■□□□□ 0.57
CCDC43-201ENST00000315286 NLRP9Q7RTR0 991 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 PLD6Q8N2A8 252 aaKnown RBP18.6■□□□□ 0.57
CCDC43-201ENST00000315286 OR52K2Q8NGK3 314 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 ERP27Q96DN0 273 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 PAWRQ96IZ0 340 aaKnown RBP18.6■□□□□ 0.57
CCDC43-201ENST00000315286 ECT2Q9H8V3 914 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 KCNK13Q9HB14 408 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 TREX1Q9NSU2 369 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 SPG21Q9NZD8 308 aa18.6■□□□□ 0.57
CCDC43-201ENST00000315286 A0A0G2JND7 137 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 C2orf78A6NCI8 922 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 TRIM43BA6NCK2 446 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 GJB3O75712 270 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 DCTN3O75935 186 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 GABRB3P28472 473 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 NCALDP61601 193 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 WDR5P61964 334 aaKnown RBP18.59■□□□□ 0.57
CCDC43-201ENST00000315286 RAB33AQ14088 237 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms