RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 SMG7Q92540 1137 aaKnown RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 TBCCD1Q9NVR7 557 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 AP4E1Q9UPM8 1137 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 ATP7AQ04656 1500 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 NEDD1Q8NHV4 660 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 SLC7A14Q8TBB6 771 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 PIWIL2Q8TC59 973 aaKnown RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 TOP1MTQ969P6 601 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 CEP295NLQ96MC4 621 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 ZNF408Q9H9D4 720 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 EFCAB9A8MZ26 197 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 RECQL5O94762 991 aaPredicted RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 PIGNO95427 931 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 TCEA1P23193 301 aaKnown RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 MAN2A2P49641 1150 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 ZNF517Q6ZMY9 492 aaPredicted RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 ZNF615Q8N8J6 731 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 SORCS3Q9UPU3 1222 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 NOL4O94818 638 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 ERVK-10P10266 1014 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 STIP1P31948 543 aaKnown RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 CNSTQ6PJW8 725 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 SGMS1Q86VZ5 419 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 VAT1Q99536 393 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 XKR8Q9H6D3 395 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 MTF2Q9Y483 593 aaPredicted RBP11.2□□□□□ -0.62
USP31-201ENST00000219689 PALLDQ8WX93 1383 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 S100A12P80511 92 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 ADGRE1Q14246 886 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 ACTRT2Q8TDY3 377 aa11.2□□□□□ -0.62
USP31-201ENST00000219689 ZNF432O94892 652 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 MGAT1P26572 445 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 HTR2BP41595 481 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 ARMC8Q8IUR7 673 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 ADCY4Q8NFM4 1077 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 BLOC1S5Q8TDH9 187 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 A0A1B0GVG6 124 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 CD40LGP29965 261 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 NKX2-5P52952 324 aaPredicted RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 GPN1Q9HCN4 374 aaPredicted RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 MED13LQ71F56 2210 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 LRRC14BA6NHZ5 514 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 IL1R1P14778 569 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 PAICSP22234 425 aaKnown RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 ZNF677Q86XU0 584 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 FAM126BQ8IXS8 530 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 PIGKQ92643 395 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 NKIRAS2Q9NYR9 191 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 CACNA1SQ13698 1873 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 SH3D21A4FU49 640 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 H0YJX3 145 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 PGRP06401 933 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 BST1Q10588 318 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 BNIP3Q12983 259 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 MPP2Q14168 576 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 TMEM214Q6NUQ4 689 aaKnown RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 HAGHLQ6PII5 290 aaPredicted RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 LRRC40Q9H9A6 602 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 UBQLN1Q9UMX0 589 aaKnown RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 TMEM114B3SHH9 223 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 EIF3DO15371 548 aaKnown RBP eCLIP11.19□□□□□ -0.62
USP31-201ENST00000219689 UGT2B4P06133 528 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 STYK1Q6J9G0 422 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 THEM5Q8N1Q8 247 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 ZNF655Q8N720 491 aaPredicted RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 PIH1D2Q8WWB5 315 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 NMUR2Q9GZQ4 415 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 MAGEE1Q9HCI5 957 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 RDH8Q9NYR8 311 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 C3orf18Q9UK00 162 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 MGAT4DA6NG13 374 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 EPHA10Q5JZY3 1008 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 RAB2BQ8WUD1 216 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 HPSEQ9Y251 543 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 ZC3H13Q5T200 1668 aaKnown RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 ZC3H11AO75152 810 aaKnown RBP eCLIP11.19□□□□□ -0.62
USP31-201ENST00000219689 RBP1P09455 135 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 ZSCAN5DPP0CG00 497 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 RFX3P48380 749 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 RXRGP48443 463 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 TOB1P50616 345 aaPredicted RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 STRIP1Q5VSL9 837 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 C1orf189Q5VU69 101 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 TWF2Q6IBS0 349 aaKnown RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 C10orf107Q8IVU9 208 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 VPS51Q9UID3 782 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 RRN3P2A6NIE6 340 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 SERPINF2P08697 491 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 PPP1R18Q6NYC8 613 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 ZNF621Q6ZSS3 439 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 ADPRHL2Q9NX46 363 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 TRPC4Q9UBN4 977 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 GTF3C4Q9UKN8 822 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 H7C2Y5 167 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 PRKAA2P54646 552 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 HIPK3Q9H422 1215 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 DNAJC18Q9H819 358 aa11.19□□□□□ -0.62
USP31-201ENST00000219689 CCNL1Q9UK58 526 aaPredicted RBP11.19□□□□□ -0.62
USP31-201ENST00000219689 RCCD1A6NED2 376 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms