RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Spats2lQ91WJ7 558 aaKnown RBP13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ophn1Q99J31 802 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ssu72Q9CY97 194 aaKnown RBP13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ropn1Q9ESG2 212 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 PalmdQ9JHU2 551 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Sf3b1Q99NB9 1304 aaKnown RBP13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Vmn2r27D3YUK6 857 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Zfp105G3X9I0 524 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 HcrtO55241 130 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Hmga1P17095 107 aaKnown RBP13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 ItgalP24063 1163 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ptpn1P35821 432 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Tmem165P52875 323 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Fut7Q11131 389 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 1810049J17RikQ3V2G9 153 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Six4Q61321 775 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 ItpkcQ7TS72 678 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Arhgap29Q8CGF1 1266 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Taf10Q8K0H5 218 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 TgdsQ8VDR7 355 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Vangl2Q91ZD4 521 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Tfap2dQ91ZK0 452 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Lysmd3Q99LE3 305 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 MajinQ9D992 256 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Stap1Q9JM90 297 aaKnown RBP13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Atp11cQ9QZW0 1129 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Arhgef26D3YYY8 869 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ccdc175E9PVB3 822 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Rgs2O08849 211 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Pax3P24610 479 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Alox15P39654 663 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Slc26a1P58735 704 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 CblbQ3TTA7 982 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Pla2g4dQ50L43 825 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Als2clQ60I26 952 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Tpp2Q64514 1262 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Stx3Q64704 289 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Nemp1Q6ZQE4 437 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Rbbp5Q8BX09 538 aaKnown RBP13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Pde10aQ8CA95 790 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Tmem82Q8R115 356 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 D8Ertd738eQ8R1F0 94 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 SarafQ8R3Q0 334 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Wrnip1Q91XU0 660 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Pcdhgb1Q91XX8 918 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Reep3Q99KK1 254 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Fbxo32Q9CPU7 355 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 GabrqQ9JLF1 638 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Slc2a5Q9WV38 501 aa13.63□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Mfsd4b4J3QNS5 503 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ebf3O08791 596 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Pik3r2O08908 722 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 TubP50586 505 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ythdf1P59326 559 aaKnown RBP13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Stxbp5lQ5DQR4 1185 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Chi3l1Q61362 389 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Olfr20Q7TRX9 314 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Hmgxb4Q80Y32 594 aaKnown RBP13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Pcmtd2Q8BHD8 359 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Nat14Q8BVG8 206 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Pcdhb4Q91XZ6 784 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Atp6v1b1Q91YH6 513 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Rfc5Q9D0F6 339 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ddx21Q9JIK5 851 aaKnown RBP13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Cdh23Q99PF4 3354 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Myo18aQ9JMH9 2050 aaKnown RBP13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 4930558K02RikE0CXC6 182 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Vmn2r88L7N1W8 857 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Chrna4O70174 629 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Cdc6O89033 562 aaKnown RBP13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Icam1P13597 537 aaKnown RBP13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Cd72P21855 354 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Parp3Q3ULW8 533 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Rnf220Q6PDX6 566 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Abcg2Q7TMS5 657 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Defb34Q7TNV8 81 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ahcyl1Q80SW1 530 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Q8BGA7 448 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Gbp9Q8BTS3 619 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ppp6r2Q8R3Q2 923 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 FtcdQ91XD4 541 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Pcdhb19Q91Y01 801 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Mtif2Q91YJ5 727 aaKnown RBP13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Stk33Q924X7 491 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Slfn2Q9Z0I6 378 aa13.62□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Lcn6A2AJB9 181 aa13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ism1A2ATD1 454 aa13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Vmn2r72D3Z4N8 856 aa13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ptar1E9QAB6 424 aa13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Scrg1O88745 98 aa13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 En1P09065 401 aa13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Matn1P51942 500 aaKnown RBP13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Ccna2P51943 422 aaKnown RBP13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Atp6v1b2P62814 511 aa13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 YwhaqP68254 245 aaKnown RBP13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Adcy6Q01341 1165 aa13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Slc6a4Q60857 630 aa13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Hif1aQ61221 836 aaKnown RBP13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Olfr1128Q7TR47 311 aa13.61□□□□□ -0.23
Rnf4-204ENSMUST00000182047 Zbtb41Q811F1 908 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 82.3 ms