RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 AenQ9CZI9 336 aaKnown RBP15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Acbd6Q9D061 282 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Hormad1Q9D5T7 392 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Lmo2P25801 158 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Galnt3P70419 633 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ntan1Q64311 310 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Fndc3bQ6NWW9 1207 aaKnown RBP15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Podnl1Q6P3Y9 559 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gxylt2Q810K9 444 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ccdc63Q8CDV6 558 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gtf2a1lQ8R4I4 468 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Fbxo21Q8VDH1 627 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gramd1aQ8VEF1 722 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 WwoxQ91WL8 414 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Crtc3Q91X84 619 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Reep3Q99KK1 254 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 FopnlQ9CZS3 174 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Slamf8Q9D3G2 278 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Bclaf3A2AG58 752 aaKnown RBP15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Armt1A6H630 439 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Clca3bE9PUL3 1044 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Myl4P09541 193 aaKnown RBP15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cct8P42932 548 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Fmo3P97501 534 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 RalgdsQ03385 852 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm5431Q5NCB3 844 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Olfr301Q7TS04 311 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Usp6nlQ80XC3 819 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pcid2Q8BFV2 399 aaKnown RBP15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Wdr59Q8C0M0 992 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 4932414N04RikQ8CEQ9 752 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 KlbQ99N32 1043 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Lyrm1Q9CQB7 122 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Vmn2r72D3Z4N8 856 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Srsf11E9Q6E5 511 aaKnown RBP15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Abhd12bG3UZN6 359 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Tnfaip1O70479 316 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Wnt7bP28047 349 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Epb41P48193 858 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Frg1P97376 258 aaKnown RBP15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Adgre1Q61549 931 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Dlgap3Q6PFD5 977 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Il17reQ8BH06 637 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Slc18a2Q8BRU6 517 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 ScgnQ91WD9 276 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Syt12Q920N7 421 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Rex1bdQ9CYZ6 169 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gdap2Q9DBL2 498 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Psma4Q9R1P0 261 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm28168A0A087WNP1 180 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm13941A2AJ38 245 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm8237E9Q257 205 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Hk2O08528 917 aaKnown RBP15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Acvr2bP27040 536 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Spryd7Q3TFQ1 196 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Zfp560Q3URI6 754 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Nfe2l1Q61985 741 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ston1Q8CDJ8 730 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Fam212aQ9CX62 282 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cdyl2Q9D5D8 503 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Map3k14Q9WUL6 942 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Smok3cA0A087WSF2 504 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Man2a2Q8BRK9 1152 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Deaf1Q9Z1T5 566 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 C87414E9PWI7 475 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm17019K7N6W5 255 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Psma3O70435 255 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Snx3O70492 162 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 CratP47934 626 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 CartptP56388 129 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Timm13P62075 95 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Proser1Q5PRE5 913 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gpr65Q61038 337 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Mef2dQ63943 514 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Dsg1bQ7TSF1 1060 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Evi2bQ8VD58 444 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pcdhb21Q91V48 774 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cybrd1Q925G2 290 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Yaf2Q99LW6 179 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Kctd4Q9D7X1 259 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Mrpl46Q9EQI8 283 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pi16Q9ET66 489 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pole3Q9JKP7 145 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Trip4Q9QXN3 581 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Sdc4O35988 198 aaKnown RBP15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Per3O70361 1113 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Aqp1Q02013 269 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gpatch4Q3TFK5 415 aaKnown RBP15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Has1Q61647 583 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Olfr297Q7TS07 310 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 NlnQ91YP2 704 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Traf7Q922B6 594 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pak1ip1Q9DCE5 382 aaKnown RBP15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Hey2Q9QUS4 339 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ap4s1Q9WVL1 144 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Osbpl10S4R1M9 766 aa15.72■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gucy2dA0A0U1RPR8 1117 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm10406A6NAS4 205 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm3373A6NAS7 205 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Grik3B1AS29 919 aa15.71■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms