RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 HgdO09173 445 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Eif3dO70194 548 aaKnown RBP9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Hoxc8P09025 242 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc1a2P43006 572 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ppp3ccP48455 513 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ephb3P54754 993 aaKnown RBP9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Erp29P57759 262 aaKnown RBP9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tctn2Q2MV57 700 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Prmt9Q3U3W5 846 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc38a10Q5I012 1090 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cnot7Q60809 285 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Olfr141Q60880 325 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 XiapQ60989 496 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mrps31Q61733 384 aaKnown RBP9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 TxlngQ8BHN1 524 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Bri3bpQ8BXV2 253 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Plekhg6Q8R0J1 787 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Lrrc8cQ8R502 803 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gpn1Q8VCE2 372 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pcdha12Q91Y18 950 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Hsd17b11Q9EQ06 298 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Aff4Q9ESC8 1160 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Caln1Q9JJG7 219 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Dnaja2Q9QYJ0 412 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Padi3Q9Z184 664 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mbd2Q9Z2E1 414 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Zswim8Q3UHH1 1832 aaKnown RBP9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Abcc12Q80WJ6 1366 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tspoap1Q7TNF8 1846 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ccdc171E9Q1U1 1324 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mllt6B1AR10 1109 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Zfp994J3QM38 661 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm4340L7N2C4 268 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 WapP01173 134 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 AgtP11859 477 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cfl1P18760 166 aaKnown RBP9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Lef1P27782 397 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Klrb1aP27811 227 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ephx2P34914 554 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mybl2P48972 704 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc1a1P51906 523 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cct7P80313 544 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Nxpe2Q3U095 558 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 VwceQ3U515 929 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 C130050O18RikQ497Y9 356 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gas6Q61592 674 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Srsf2Q62093 221 aaKnown RBP9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Zfp606Q7TSV0 794 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Q8BL95 290 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Dnali1Q8BVN8 258 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Fam46bQ8C152 427 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mrpl48Q8JZS9 211 aaKnown RBP9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Kiaa0513Q8R0A7 407 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tbc1d13Q8R3D1 400 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Spsb4Q8R5B6 273 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Acad8Q9D7B6 413 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 1700020A23RikQ9DA59 131 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Klc4Q9DBS5 619 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 ParvbQ9ES46 365 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 PigbQ9JJQ0 542 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pdk2Q9JK42 407 aa9.21□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ric1Q69ZJ7 1422 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm7792A0A0J9YU01 481 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm3183D3YUJ6 481 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Pcdh17E9PXF0 1157 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ccdc188F6WEU2 249 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm3139J3QK78 481 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm3106J3QPH3 481 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Asna1O54984 348 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Hnrnpa2b1O88569 353 aaKnown RBP9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cited1P97769 203 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Samd11Q1RNF8 542 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Q3UE31 404 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ppm1hQ3UYC0 513 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Mre11Q61216 706 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Trpv1Q704Y3 839 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 OpalinQ7M750 143 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr1415Q7TQS4 311 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Nek5Q7TSC3 627 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Polr2eQ80UW8 210 aaKnown RBP9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Mup21Q80YX8 181 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Btbd7Q8CFE5 1130 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Arhgap29Q8CGF1 1266 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Kcnq3Q8K3F6 873 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tgif2lx2Q8K5B9 231 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Abhd6Q8R2Y0 336 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 DolkQ8R2Y3 534 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 CpzQ8R4V4 654 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Oas1hQ8VI97 369 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tekt2Q922G7 430 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 MlycdQ99J39 492 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Polr3kQ9CQZ7 108 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sf3a3Q9D554 501 aaKnown RBP9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Samd8Q9DA37 478 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Lonp2Q9DBN5 852 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cpb2Q9JHH6 422 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Chrna6Q9R0W9 494 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 EdarQ9R187 448 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gdf11Q9Z1W4 405 aa9.21□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Syde2E9PUP1 1314 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms