RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Mrfap1Q9CQL7 125 aa9.02□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Cul1Q9WTX6 776 aa9.02□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 PapolbQ9WVP6 641 aa9.02□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 PikfyveQ9Z1T6 2097 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Chd7A2AJK6 2986 aaKnown RBP9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Igkv10-95A0A0G2JFY3 115 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Lekr1B2RVN1 116 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Siah3B2RWG3 268 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Fbrsl1E9Q9T0 1031 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Cyp4f40G3UW81 524 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 PrkcshO08795 521 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Nedd9O35177 833 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Ctbp1O88712 441 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Chrm1P12657 460 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Eno1P17182 434 aaKnown RBP9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Gja4P28235 333 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Ccna2P51943 422 aaKnown RBP9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Rab6bP61294 208 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 PrkcgP63318 697 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Cog7Q3UM29 770 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Gm29609Q3UU56 907 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Stard3Q61542 446 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Ccdc25Q78PG9 208 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Fstl5Q8BFR2 847 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Gtf3c2Q8BL74 907 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Adipor2Q8BQS5 386 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 LipmQ8K2A6 422 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Lgi2Q8K4Z0 550 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Grhl1Q921D9 618 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Decr1Q9CQ62 335 aaKnown RBP9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Lsm7Q9CQQ8 103 aaKnown RBP9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 DtnaQ9D2N4 746 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Mrps33Q9D2R8 106 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Exoc2Q9D4H1 924 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Rpl4Q9D8E6 419 aaKnown RBP9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 C1qtnf1Q9QXP7 281 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Nphs1Q9QZS7 1256 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Rev3lQ61493 3122 aa9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Myo18aQ9JMH9 2050 aaKnown RBP9.02□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Olfr742A2RTP5 311 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Zfp952B0V2W4 504 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Kcna10B2RQA1 511 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Ppp1r36D3Z0R2 411 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Gm5814J3QP80 125 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Gm8108K7N734 216 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Gm2888K7N746 267 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Sema3aO08665 772 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Syn1O88935 706 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 RargP18911 458 aaKnown RBP9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Dsc1P55849 886 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Vsnl1P62761 191 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Tubb5P99024 444 aaKnown RBP9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Atp13a5Q3TYU2 1216 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 ItgadQ3V0T4 1168 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 EndouQ3V188 412 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Foxj1Q61660 421 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Atl2Q6PA06 583 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Prmt8Q6PAK3 394 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Vmn2r26Q6TAC4 855 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Tecpr1Q80VP0 1166 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Slc51bQ80WK2 128 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Dnali1Q8BVN8 258 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Rell1Q8K2J7 272 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Znf668Q8K2R5 619 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Zdhhc12Q8VC90 267 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Oas1dQ8VI95 361 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 KmoQ91WN4 479 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Serpina3nQ91WP6 418 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Fam174aQ9D3L0 190 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Kifc1Q9QWT9 674 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Piezo1E2JF22 2547 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Chd3B1AR17 2055 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Cilp2D3Z7H8 1162 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Bub1O08901 1058 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 ComtO88587 265 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Adh5P28474 374 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Pebp1P70296 187 aaKnown RBP9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Lig3P97386 1015 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Eml1Q05BC3 814 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Armc7Q3UJZ3 198 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Foxred2Q3USW5 665 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Afap1l2Q5DTU0 825 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Gcnt3Q5JCT0 437 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Ehbp1Q69ZW3 1231 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Parp6Q6P6P7 630 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Q8BHR8 331 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Gm6377Q8BHV4 303 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Slc41a1Q8BJA2 512 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Trip10Q8CJ53 603 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Spp2Q8K1I3 203 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Cd207Q8VBX4 331 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 CrebzfQ91ZR3 358 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Snf8Q9CZ28 258 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 ToporslQ9D2F8 683 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Duoxa2Q9D311 320 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Fhl5Q9WTX7 284 aa9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Orc1Q9Z1N2 840 aaKnown RBP9.01□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Gm597E9Q8J5 896 aa9□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Sypl1O09117 261 aa9□□□□□ -0.97
Ccdc28a-201ENSMUST00000052648 Shoc2O88520 582 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms