RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Tubd1Q9R1K7 455 aa13.62□□□□□ -0.23
Nup88-201ENSMUST00000035283 Trpc7Q9WVC5 862 aa13.62□□□□□ -0.23
Nup88-201ENSMUST00000035283 Btbd19S4R1I0 287 aa13.62□□□□□ -0.23
Nup88-201ENSMUST00000035283 DgkdE9PUQ8 1220 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Znf683I7HJS4 458 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gm6408J3QNG1 320 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gm3402K7N5P2 326 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Csrp3P50462 194 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Clec4fP70194 548 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Cyb5r2Q3KNK3 276 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Arhgap17Q3UIA2 846 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Snx25Q3ZT31 840 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Dcaf15Q6PFH3 600 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Fra10ac1Q8BP78 315 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Usp43Q8BUM9 1132 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Prr33Q8C494 260 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Slc15a5Q8CBB2 566 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ace2Q8R0I0 805 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Zfp64Q99KE8 643 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Tpgs1Q99MS8 303 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Sike1Q9CPR7 207 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 CrotQ9DC50 612 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ngly1Q9JI78 651 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Slamf1Q9QUM4 343 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Nme7Q9QXL8 395 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 NrapQ80XB4 1728 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Brca1P48754 1812 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Zscan4eA0A1B0GRE8 505 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 IsxA1A546 240 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Mtx3D3YTP3 312 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Vmn2r61L7N2B8 865 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Cyp27b1O35084 507 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Stat5aP42230 793 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Tmprss15P97435 1069 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Il6stQ00560 917 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Nek10Q3UGM2 1111 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Tmem26Q3UP23 366 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Rbm44Q3V089 1013 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 JrkQ60976 557 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 PtprrQ62132 656 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Deup1Q7M6Y5 601 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Mtmr10Q7TPM9 771 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 ChfrQ810L3 664 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 DseQ8BLI4 958 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Prkaa2Q8BRK8 552 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Vopp1Q8R1C3 172 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Slc5a9Q8VDT1 685 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Acot13Q9CQR4 140 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Cdyl2Q9D5D8 503 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Cdkl2Q9QUK0 568 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Aqp5Q9WTY4 265 aa13.61□□□□□ -0.23
Nup88-201ENSMUST00000035283 Trbv4A0A075B5I2 113 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gm5751A2AHC8 147 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ssxb8B1AY40 170 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Vmn2r24D3YUI0 854 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Olfr1354E9Q5G9 310 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Herc6F2Z461 1003 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Vmn2r5K7N788 911 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gria2P23819 883 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Casp2P29594 452 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Eci1P42125 289 aaKnown RBP13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Hmgcs2P54869 508 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Slfn4Q3UV66 602 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Grm5Q3UVX5 1203 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Syce1lQ5D525 247 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Serpina12Q7TMF5 413 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Olfr389Q7TRX7 312 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Olfr297Q7TS07 310 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Rnf38Q8BI21 518 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Zcchc4Q8BKW4 512 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Slc44a2Q8BY89 706 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Slc46a2Q8CA03 479 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 PdgfcQ8CI19 345 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Anxa13Q99JG3 317 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Pex11bQ9Z210 259 aa13.6□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gm43518A0A0G2JGB6 165 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gm14401A2ARV7 303 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 SmoktcrA2KF29 484 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Chrna4O70174 629 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 BrafP28028 804 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Adra2bP30545 450 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Dlx2P40764 332 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 EdnrbP48302 442 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 CcnfP51944 777 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Txnl4aP83877 142 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Larp7Q05CL8 570 aaKnown RBP13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Micall2Q3TN34 1009 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Pag1Q3U1F9 429 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Trim75Q3UWZ0 467 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 DdnQ80TS7 710 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ugt2a1Q80X89 528 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Tdp1Q8BJ37 609 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Arhgef33Q8BW86 850 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Tp53bp2Q8CG79 1128 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Slc30a5Q8R4H9 761 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Twf1Q91YR1 350 aaKnown RBP13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Fam162aQ9D6U8 155 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Lrrc46Q9DAP0 323 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Eif4e3Q9DBB5 207 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Rnft1Q9DCN7 395 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms