RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Lig4Q8BTF7 911 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Slco4a1Q8K078 723 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Map4k3Q99JP0 894 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mcrs1Q99L90 462 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Nck1Q99M51 377 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Q9D3J9 298 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Vmn2r70K7N702 854 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Bub1O08901 1058 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Traf2P39429 501 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Kcnj6P48542 425 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ebf1Q07802 591 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Krt2Q3TTY5 707 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 CamkvQ3UHL1 512 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfml2bQ3V1G4 746 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Itga1Q3V3R4 1179 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cyp3a13Q64464 503 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Nlrp9cQ66X01 1004 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cxcr1Q810W6 351 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mettl21cQ8BLU2 248 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Prpf18Q8BM39 342 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Brat1Q8C3R1 822 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Plac9Q8K262 108 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Stk32cQ8QZV4 488 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 B4galt3Q91YY2 395 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 NamptQ99KQ4 491 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Copg1Q9QZE5 874 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Per1O35973 1291 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ulk3Q3U3Q1 472 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Plcl1Q3USB7 1096 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Pan2Q8BGF7 1200 aaKnown RBP11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Sfrp1Q8C4U3 314 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gsto2Q8K2Q2 248 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mrps17Q9CQE3 120 aaKnown RBP11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Spag6Q9JLI7 507 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Egfl7Q9QXT5 275 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Psmd13Q9WVJ2 376 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mrpl40Q9Z2Q5 206 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Kcnt2D3Z649 1135 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm8267E9Q207 261 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr726E9Q8X3 321 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm10722F6VLK5 217 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm10801F7C7Q0 168 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 CrymO54983 313 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 HcrtO55241 130 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr725Q05A45 321 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Pnpla5Q32LZ8 432 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Slc22a16Q497L8 649 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Fcrl5Q68SN8 596 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Samd4bQ80XS6 687 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Clptm1lQ8BXA5 539 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 PgdQ9DCD0 483 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Pold3Q9EQ28 462 aa11.46□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Skint3A7TZF0 458 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ap3d1O54774 1199 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 InaP46660 501 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pdlim7Q3TJD7 457 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gm11437Q5QR91 290 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Snx32Q80ZJ7 404 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Xylt1Q811B1 953 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gtf3c4Q8BMQ2 817 aaKnown RBP11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Fam163bQ8BUM6 167 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Camk1dQ8BW96 385 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Znf385bQ8BXJ8 482 aaKnown RBP11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 TpbglQ8C013 384 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Vps26bQ8C0E2 336 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Aph1bQ8C7N7 257 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ipo11Q8K2V6 975 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Snrpb2Q9CQI7 225 aaKnown RBP11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Fam136aQ9CR98 138 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Snx2Q9CWK8 519 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Prorsd1Q9D820 169 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 AgkQ9ESW4 421 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 IsxA1A546 240 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 L3mbtl1A2A5N8 826 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Il6raP22272 460 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Nat1P50294 290 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 BtrcQ3ULA2 605 aaKnown RBP11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Olfm4Q3UZZ4 505 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Best2Q8BGM5 508 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Fut11Q8BHC9 489 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pgs1Q8BHF7 553 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hectd2Q8CDU6 774 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Plcl2Q8K394 1128 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Itfg1Q99KW9 610 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mccc1Q99MR8 717 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tmem114Q9D563 222 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Igdcc4Q9EQS9 1252 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tspan3Q9QY33 253 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Greb1lB9EJV3 1913 aa11.46□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Vmn2r121A2BE32 847 aa11.45□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gm8113E0CXS8 587 aa11.45□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rhox6O70238 227 aa11.45□□□□□ -0.58
Topbp1-201ENSMUST00000035164 StamP70297 548 aa11.45□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Inf2Q0GNC1 1273 aa11.45□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Lrrc14bQ3UJB3 510 aa11.45□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rad54bQ6PFE3 886 aa11.45□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hsfy2Q80Y37 392 aa11.45□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Amigo2Q80ZD9 519 aa11.45□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tmtc4Q8BG19 741 aa11.45□□□□□ -0.58
Topbp1-201ENSMUST00000035164 VcpkmtQ8C436 228 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms