RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 CLK1P49759 484 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 SLC12A3P55017 1021 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 CRHR2Q13324 411 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 TRIP10Q15642 601 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 ALKBH2Q6NS38 261 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 C1orf186Q6ZWK4 172 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 GPSM1Q86YR5 675 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 NRSN1Q8IZ57 195 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 SLC35C1Q96A29 364 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 FERD3LQ96RJ6 166 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 ZMYM5Q9UJ78 669 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 MRPS33Q9Y291 106 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 ARHGEF28Q8N1W1 1705 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 M0R3G1 203 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 GPR25O00155 361 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 GPM6BQ13491 265 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 CCDC92Q53HC0 331 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 SNX30Q5VWJ9 437 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 HERVK_113Q902F9 699 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 HIC2Q96JB3 615 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 ZFP14Q9HCL3 533 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 IL1RAPL1Q9NZN1 696 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 TNPO3Q9Y5L0 923 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 KIF20BQ96Q89 1820 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 COL14A1Q05707 1796 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 TM9SF1O15321 606 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 TREHO43280 583 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 SGTAO43765 313 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 UBOX5O94941 541 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 SLC25A14O95258 325 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 CES1P23141 567 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 PRR23BQ6ZRT6 265 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 TSHZ1Q6ZSZ6 1077 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 FAM35AQ86V20 835 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 IFNL1Q8IU54 200 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 IL31RAQ8NI17 732 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 GPR20Q99678 358 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 SLC39A8Q9C0K1 460 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 RAD21L1Q9H4I0 556 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 DCLRE1BQ9H816 532 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 PHTF1Q9UMS5 762 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 CNTNAP1P78357 1384 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 MEIS2O14770 477 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 B4GALT5O43286 388 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 SYN1P17600 705 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 PLOD1Q02809 727 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 RCN1Q15293 331 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 TAF13Q15543 124 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 TRIM60Q495X7 471 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 LYPLAL1Q5VWZ2 237 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 NAIF1Q69YI7 327 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 FNDC5Q8NAU1 212 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 KIAA0895Q8NCT3 520 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 OR14C36Q8NHC7 312 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 THAP11Q96EK4 314 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 PAPOLBQ9NRJ5 636 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 INTS7Q9NVH2 962 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 DUS2Q9NX74 493 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 AGO1Q9UL18 857 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 KLHL20Q9Y2M5 609 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 CAMTA1Q9Y6Y1 1673 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 PTPRJQ12913 1337 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 XPO1O14980 1071 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 ARF4P18085 180 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 GTF2BQ00403 316 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 HSDL1Q3SXM5 330 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 FGD2Q7Z6J4 655 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 YTHDF3Q7Z739 585 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 SYT12Q8IV01 421 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 MICU2Q8IYU8 434 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 FEM1CQ96JP0 617 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 SEMA3CQ99985 751 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 MID1IP1Q9NPA3 183 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 AVENQ9NQS1 362 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 PIH1D1Q9NWS0 290 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 ERVW-1Q9UQF0 538 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 DERAQ9Y315 318 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 ATP9AO75110 1047 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 PSMD8P48556 350 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 TAF10Q12962 218 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 BMPR2Q13873 1038 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 PARP6Q2NL67 630 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 TATDN1Q6P1N9 297 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 FUT10Q6P4F1 479 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 GALNT4Q8N4A0 578 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 TMEM161BQ8NDZ6 487 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 ZFP28Q8NHY6 868 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 ING5Q8WYH8 240 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 CPNE1Q99829 537 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 PRRG4Q9BZD6 226 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 KCNMB3Q9NPA1 279 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 ZDHHC4Q9NPG8 344 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 CNGB3Q9NQW8 809 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 ARHGAP28Q9P2N2 729 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 ASF1AQ9Y294 204 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 UBDO15205 165 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 RGS14O43566 566 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 TTPAP49638 278 aa9.91□□□□□ -0.82
CLTCL1-211ENST00000621271 DSG1Q02413 1049 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms