RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ATAD3CQ5T2N8 411 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 PDSS1Q5T2R2 415 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 ZBTB37Q5TC79 503 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 C5orf46Q6UWT4 87 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 HHIPL2Q6UWX4 724 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 COMTD1Q86VU5 262 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 CLEC4FQ8N1N0 589 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 ANKRD42Q8N9B4 389 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 MCUQ8NE86 351 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 RAET1EQ8TD07 263 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 CABLES1Q8TDN4 633 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 MFSD14AQ96MC6 490 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 CRAMP1Q96RY5 1269 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 NTMT1Q9BV86 223 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 POLR1EQ9GZS1 481 aaKnown RBP9□□□□□ -0.97
COMMD3-215ENST00000602574 CAB39LQ9H9S4 337 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 NMUR1Q9HB89 426 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 KCNK9Q9NPC2 374 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 TAB2Q9NYJ8 693 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 TJP2Q9UDY2 1190 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 POLIQ9UNA4 740 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 ZFR2Q9UPR6 939 aaKnown RBP9□□□□□ -0.97
COMMD3-215ENST00000602574 SNX13Q9Y5W8 968 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 SNCAIPQ9Y6H5 919 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 C4AP0C0L4 1744 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 C4BP0C0L5 1744 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 NWD1Q149M9 1564 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 hCG_1642624A0A1W2PR95 340 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 OR6C74A6NCV1 312 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 FAM155AB1AL88 458 aaPredicted RBP9□□□□□ -0.97
COMMD3-215ENST00000602574 RIMBP2O15034 1052 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 PPM1DO15297 605 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 BRINP1O60477 761 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 MFN2O95140 757 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 TTLL1O95922 423 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 RB1P06400 928 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 CD247P20963 164 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 PDIA3P30101 505 aaKnown RBP9□□□□□ -0.97
COMMD3-215ENST00000602574 CYP2C18P33260 490 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 ZAP70P43403 619 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 DGKQP52824 942 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 KCNJ10P78508 379 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 ABRQ12979 859 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 CCNG2Q16589 344 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 PFKFB4Q16877 469 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 C21orf62-AS1Q17RA5 79 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 FGD3Q5JSP0 725 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 AACSQ86V21 672 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 C12orf40Q86WS4 652 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 CARM1Q86X55 608 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 PLCZ1Q86YW0 608 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 PQLC1Q8N2U9 271 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 DAGLBQ8NCG7 672 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 SNX19Q92543 992 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 GTF3AQ92664 365 aaKnown RBP9□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF416Q9BWM5 594 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 TINAGL1Q9GZM7 467 aaPredicted RBP9□□□□□ -0.97
COMMD3-215ENST00000602574 JMJD4Q9H9V9 463 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 CXorf21Q9HAI6 301 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 ADPRHL2Q9NX46 363 aa9□□□□□ -0.97
COMMD3-215ENST00000602574 SLC12A8A0AV02 714 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 TMEM82A0PJX8 343 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 ACOD1A6NK06 481 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 ZBTB5O15062 677 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 KRT18P05783 430 aaKnown RBP8.99□□□□□ -0.97
COMMD3-215ENST00000602574 ASNSP08243 561 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 ZBTB48P10074 688 aaPredicted RBP8.99□□□□□ -0.97
COMMD3-215ENST00000602574 FDPSP14324 419 aaKnown RBP8.99□□□□□ -0.97
COMMD3-215ENST00000602574 MAP4P27816 1152 aaKnown RBP8.99□□□□□ -0.97
COMMD3-215ENST00000602574 IL12AP29459 219 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 CAPZA2P47755 286 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 SOX9P48436 509 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 RAB13P51153 203 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 TGFB2P61812 414 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF200P98182 395 aaPredicted RBP8.99□□□□□ -0.97
COMMD3-215ENST00000602574 EXOSC10Q01780 885 aaKnown RBP8.99□□□□□ -0.97
COMMD3-215ENST00000602574 SLC39A6Q13433 755 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 MPP2Q14168 576 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 GCKRQ14397 625 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 KIZQ2M2Z5 673 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 MCMDC2Q4G0Z9 681 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 ZFP1Q6P2D0 407 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 DCUN1D2Q6PH85 259 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 ZDHHC24Q6UX98 284 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 FBXO33Q7Z6M2 555 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 KIF18BQ86Y91 864 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 PARP8Q8N3A8 854 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 TPCN2Q8NHX9 752 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 IFI44Q8TCB0 444 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 SLC13A3Q8WWT9 602 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 COL26A1Q96A83 441 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 SLC22A18Q96BI1 424 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 GAS2L1Q99501 681 aaPredicted RBP8.99□□□□□ -0.97
COMMD3-215ENST00000602574 CDADC1Q9BWV3 514 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 FBXO8Q9NRD0 319 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 PCDHB16Q9NRJ7 776 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 ING3Q9NXR8 418 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 FETUBQ9UGM5 382 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 SERTAD1Q9UHV2 236 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms