RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 HOXD9P28356 352 aaPredicted RBP23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 STX2P32856 288 aa23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 BMP8BP34820 402 aa23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 SLCO1A2P46721 670 aa23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 NTHL1P78549 312 aa23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 MPP3Q13368 585 aa23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 RFTN1Q14699 578 aaPredicted RBP23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 TDHQ8IZJ6 230 aa23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 FAM76AQ8TAV0 307 aa23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 MRPL38Q96DV4 380 aaKnown RBP23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 OXNAD1Q96HP4 312 aaPredicted RBP23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 SMG9Q9H0W8 520 aaKnown RBP23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 CASS4Q9NQ75 786 aa23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 BFARQ9NZS9 450 aa23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 FETUBQ9UGM5 382 aa23.39■■□□□ 1.34
SPTBN4-210ENST00000596900 PAPLNO95428 1278 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 SESN2P58004 480 aaPredicted RBP23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 ITKQ08881 620 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 CDH17Q12864 832 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 SPARCL1Q14515 664 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 RNF219Q5W0B1 726 aaPredicted RBP23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 CASC4Q6P4E1 433 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 IGDCC3Q8IVU1 814 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 MFN1Q8IWA4 741 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 OR52K2Q8NGK3 314 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 USP13Q92995 863 aaPredicted RBP23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 STAMBPL1Q96FJ0 436 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 CFAP36Q96G28 342 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 FSD1LQ9BXM9 530 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 ACE2Q9BYF1 805 aaPredicted RBP23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 POLR1EQ9GZS1 481 aaKnown RBP23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 ACSS3Q9H6R3 686 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 VPS45Q9NRW7 570 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 UBP1Q9NZI7 540 aa23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 UBA2Q9UBT2 640 aaPredicted RBP23.39■■□□□ 1.33
SPTBN4-210ENST00000596900 AGTP01019 485 aa23.38■■□□□ 1.33
SPTBN4-210ENST00000596900 AGGF1Q8N302 714 aaeCLIP23.38■■□□□ 1.33
SPTBN4-210ENST00000596900 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.38■■□□□ 1.33
SPTBN4-210ENST00000596900 OR52K1Q8NGK4 314 aa23.38■■□□□ 1.33
SPTBN4-210ENST00000596900 SPATA22Q8NHS9 363 aa23.38■■□□□ 1.33
SPTBN4-210ENST00000596900 FBF1Q8TES7 1133 aa23.38■■□□□ 1.33
SPTBN4-210ENST00000596900 SAMD15Q9P1V8 674 aa23.38■■□□□ 1.33
SPTBN4-210ENST00000596900 TBC1D14Q9P2M4 693 aa23.38■■□□□ 1.33
SPTBN4-210ENST00000596900 CCL26Q9Y258 94 aa23.38■■□□□ 1.33
SPTBN4-210ENST00000596900 TCF3P15923 654 aa23.37■■□□□ 1.33
SPTBN4-210ENST00000596900 TMC5Q6UXY8 1006 aa23.37■■□□□ 1.33
SPTBN4-210ENST00000596900 TIFAQ96CG3 184 aa23.37■■□□□ 1.33
SPTBN4-210ENST00000596900 IMP4Q96G21 291 aaKnown RBP23.37■■□□□ 1.33
SPTBN4-210ENST00000596900 CYTH2Q99418 400 aa23.37■■□□□ 1.33
SPTBN4-210ENST00000596900 SEPT3Q9UH03 358 aa23.37■■□□□ 1.33
SPTBN4-210ENST00000596900 SLC24A2Q9UI40 661 aa23.37■■□□□ 1.33
SPTBN4-210ENST00000596900 RABGEF1Q9UJ41 708 aa23.37■■□□□ 1.33
SPTBN4-210ENST00000596900 USP12O75317 370 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 MT-CYBP00156 380 aaPredicted RBP23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 MGAT1P26572 445 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 NPY2RP49146 381 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 KCNC3Q14003 757 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 TDRPQ86YL5 185 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 IPMKQ8NFU5 416 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 GSDMBQ8TAX9 411 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 XPO6Q96QU8 1125 aaKnown RBP23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 TBL1YQ9BQ87 522 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 KIF9Q9HAQ2 790 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 NOVA2Q9UNW9 492 aaKnown RBP23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 TCRBV9S1A1TA0A576 114 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 EPOPA6NHQ4 379 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 CBX4O00257 560 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 CEBPBP17676 345 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 PGAM1P18669 254 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 GEMIN4P57678 1058 aaKnown RBP23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 MPP5Q8N3R9 675 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 CINPQ9BW66 212 aaPredicted RBP23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 IL22Q9GZX6 179 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 VPS28Q9UK41 221 aa23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 NUP210Q8TEM1 1887 aaPredicted RBP23.36■■□□□ 1.33
SPTBN4-210ENST00000596900 POC1B-GALNT4F8VUJ3 575 aa23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 MAXP61244 160 aa23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 USP4Q13107 963 aa23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 RASA2Q15283 850 aa23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 SKIDA1Q1XH10 827 aa23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 TPGS1Q6ZTW0 290 aa23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 TNS4Q8IZW8 715 aa23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 SH2D3CQ8N5H7 860 aa23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 C12orf76Q8N812 135 aaPredicted RBP23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 ING5Q8WYH8 240 aa23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 OTUB2Q96DC9 234 aa23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 RANBP2P49792 3224 aaKnown RBP23.35■■□□□ 1.33
SPTBN4-210ENST00000596900 MAGEB16A2A368 324 aa23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 ZNF77Q15935 545 aa23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 UNC5AQ6ZN44 842 aa23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 ARID3BQ8IVW6 561 aaPredicted RBP23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 ARFGAP2Q8N6H7 521 aa23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 ZNF557Q8N988 423 aaPredicted RBP23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 BHMTQ93088 406 aa23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 TLCD1Q96CP7 247 aa23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 PSKH2Q96QS6 385 aa23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 FEM1AQ9BSK4 669 aa23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 PIH1D1Q9NWS0 290 aaKnown RBP23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 SYBUQ9NX95 663 aa23.34■■□□□ 1.33
SPTBN4-210ENST00000596900 LGALS13Q9UHV8 139 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms