RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 SEMA6AQ9H2E6 1030 aa15.5■□□□□ 0.07
SAFB-205ENST00000588852 XPR1Q9UBH6 696 aa15.5■□□□□ 0.07
SAFB-205ENST00000588852 STK39Q9UEW8 545 aa15.5■□□□□ 0.07
SAFB-205ENST00000588852 UBQLN1Q9UMX0 589 aaKnown RBP15.5■□□□□ 0.07
SAFB-205ENST00000588852 OTOFQ9HC10 1997 aa15.5■□□□□ 0.07
SAFB-205ENST00000588852 MYBPHLA2RUH7 354 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 RGSL1A5PLK6 1076 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 C9IYK1 514 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 VAPBO95292 243 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 GJA5P36382 358 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 IREB2P48200 963 aaKnown RBP15.49■□□□□ 0.07
SAFB-205ENST00000588852 TAF6P49848 677 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 GJA9P57773 515 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 CYLC2Q14093 348 aaPredicted RBP15.49■□□□□ 0.07
SAFB-205ENST00000588852 ZC3HC1Q86WB0 502 aaKnown RBP15.49■□□□□ 0.07
SAFB-205ENST00000588852 RNF135Q8IUD6 432 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 METTL25Q8N6Q8 603 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 NAT14Q8WUY8 206 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 ISL2Q96A47 359 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 PCDHAC1Q9H158 963 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 TNFRSF12AQ9NP84 129 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 TLK1Q9UKI8 766 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 DLX3O60479 287 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 CRTAMO95727 393 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 GRM2Q14416 872 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 CNGA3Q16281 694 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 NOMO2Q5JPE7 1267 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 GPC2Q8N158 579 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 PIP4K2CQ8TBX8 421 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 UPF1Q92900 1129 aaKnown RBP eCLIP15.49■□□□□ 0.07
SAFB-205ENST00000588852 NDNQ99608 321 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 SIK2Q9H0K1 926 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 MROH8Q9H579 483 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 CYP4F12Q9HCS2 524 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 CRTAC1Q9NQ79 661 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 RCOR3Q9P2K3 495 aaPredicted RBP15.49■□□□□ 0.07
SAFB-205ENST00000588852 PSMD13Q9UNM6 376 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 MTF2Q9Y483 593 aaPredicted RBP15.49■□□□□ 0.07
SAFB-205ENST00000588852 SBF1O95248 1867 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 CASQ2O14958 399 aaPredicted RBP15.49■□□□□ 0.07
SAFB-205ENST00000588852 PEX1O43933 1283 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 CSPG5O95196 566 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 PGK1P00558 417 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 TFAP2AP05549 437 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 MMP3P08254 477 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 THRAP10827 490 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 PLK1P53350 603 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 NRF1Q16656 503 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 PIGGQ5H8A4 983 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 TSTD2Q5T7W7 516 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 ESRP1Q6NXG1 681 aaKnown RBP15.49■□□□□ 0.07
SAFB-205ENST00000588852 BNC2Q6ZN30 1099 aaPredicted RBP15.49■□□□□ 0.07
SAFB-205ENST00000588852 GK5Q6ZS86 529 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 EPAS1Q99814 870 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 MCMBPQ9BTE3 642 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 GRIP2Q9C0E4 1043 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 DRC3Q9H069 523 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 KATNBL1Q9H079 304 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 WDR41Q9HAD4 459 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 GMPR2Q9P2T1 348 aaKnown RBP15.49■□□□□ 0.07
SAFB-205ENST00000588852 OR12D3Q9UGF7 316 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 STAP1Q9ULZ2 295 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 RAP2CQ9Y3L5 183 aa15.49■□□□□ 0.07
SAFB-205ENST00000588852 ANKRD33BA6NCL7 494 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 CCDC160A6NGH7 325 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 MPOP05164 745 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 PABPC4LP0CB38 370 aaKnown RBP15.48■□□□□ 0.07
SAFB-205ENST00000588852 YBX3P16989 372 aaKnown RBP eCLIP15.48■□□□□ 0.07
SAFB-205ENST00000588852 FGFR3P22607 806 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 PPIDQ08752 370 aaKnown RBP15.48■□□□□ 0.07
SAFB-205ENST00000588852 NAB1Q13506 487 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 ZNF792Q3KQV3 632 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 BNIPLQ7Z465 357 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 SPATA24Q86W54 205 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 CDCA5Q96FF9 252 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 LRGUKQ96M69 825 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 HNRNPABQ99729 332 aaKnown RBP15.48■□□□□ 0.07
SAFB-205ENST00000588852 TKTL2Q9H0I9 626 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 LZTS1Q9Y250 596 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 COPG1Q9Y678 874 aaKnown RBP15.48■□□□□ 0.07
SAFB-205ENST00000588852 AP4B1Q9Y6B7 739 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 KCNU1A8MYU2 1149 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 LRIG2O94898 1065 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 TSPAN8P19075 237 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.48■□□□□ 0.07
SAFB-205ENST00000588852 LIPMQ5VYY2 423 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 RBM44Q6ZP01 1051 aaKnown RBP15.48■□□□□ 0.07
SAFB-205ENST00000588852 ZNF410Q86VK4 478 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 ANKRD13AQ8IZ07 590 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 ZMIZ2Q8NF64 920 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 IPMKQ8NFU5 416 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 TNIP3Q96KP6 325 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 SMOQ99835 787 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 GBA3Q9H227 469 aa15.48■□□□□ 0.07
SAFB-205ENST00000588852 DMAP1Q9NPF5 467 aaPredicted RBP15.48■□□□□ 0.07
SAFB-205ENST00000588852 TRIP12Q14669 1992 aaPredicted RBP15.47■□□□□ 0.07
SAFB-205ENST00000588852 DFFAO00273 331 aa15.47■□□□□ 0.07
SAFB-205ENST00000588852 TRPA1O75762 1119 aa15.47■□□□□ 0.07
SAFB-205ENST00000588852 CHRNA4P43681 627 aa15.47■□□□□ 0.07
SAFB-205ENST00000588852 PPP1R3AQ16821 1122 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms