RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 RINLQ6ZS11 566 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 C14orf80Q86SX3 495 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 DTX3LQ8TDB6 740 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 TUBB6Q9BUF5 446 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 SMOC2Q9H3U7 446 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 RBM22Q9NW64 420 aaKnown RBP eCLIP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 ARHGEF38Q9NXL2 777 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 PCDHB8Q9UN66 801 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 HNRNPCL1O60812 293 aaKnown RBP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 TBX10O75333 385 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 SOAT2O75908 522 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 PROCP04070 461 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 CYP2C18P33260 490 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 ITKQ08881 620 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 PDCD2Q16342 344 aaPredicted RBP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 NOMO2Q5JPE7 1267 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 LRRC74BQ6ZQY2 392 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 ZNF598Q86UK7 904 aaKnown RBP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 RTN4RL1Q86UN2 441 aaPredicted RBP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 ARHGAP12Q8IWW6 846 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 ACVR1CQ8NER5 493 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 PTCD3Q96EY7 689 aaKnown RBP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 TBL1YQ9BQ87 522 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 COPG2Q9UBF2 871 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 E9PAM4 449 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 GSC2O15499 205 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 GSRP00390 522 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 SERPINE1P05121 402 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 HMBSP08397 361 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 RALBP11234 206 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 CPA3P15088 417 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 TYMPP19971 482 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 TM4SF4P48230 202 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 LAMB3Q13751 1172 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 UBAP2LQ14157 1087 aaKnown RBP13.89□□□□□ -0.19
SRSF1-205ENST00000582730 CLLU1OSQ5K130 101 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 CCSAPQ6IQ19 270 aaPredicted RBP13.89□□□□□ -0.19
SRSF1-205ENST00000582730 LINC00523Q86TU6 105 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 MIB1Q86YT6 1006 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 ATAD1Q8NBU5 361 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 RAB3IL1Q8TBN0 382 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 PIWIL2Q8TC59 973 aaKnown RBP13.89□□□□□ -0.19
SRSF1-205ENST00000582730 VPS39Q96JC1 886 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 HAPLN3Q96S86 360 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 ACSS2Q9NR19 701 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 OSER1Q9NX31 292 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 SOX13Q9UN79 622 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 AAR2Q9Y312 384 aaKnown RBP13.89□□□□□ -0.19
SRSF1-205ENST00000582730 HS3ST4Q9Y661 456 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 IGLV3-25P01717 112 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 SLC34A1Q06495 639 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 EFEMP1Q12805 493 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 HSF5Q4G112 596 aaPredicted RBP13.89□□□□□ -0.19
SRSF1-205ENST00000582730 SLC24A5Q71RS6 500 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 TREML1Q86YW5 311 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 TTC9BQ8N6N2 239 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 ZNF419Q96HQ0 510 aaPredicted RBP13.89□□□□□ -0.19
SRSF1-205ENST00000582730 TRAPPC9Q96Q05 1148 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 GLOD4Q9HC38 313 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 PNPOQ9NVS9 261 aa13.89□□□□□ -0.19
SRSF1-205ENST00000582730 MAGEB16A2A368 324 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 B2RBV5 119 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 TNFRSF10BO14763 440 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 PHGDHO43175 533 aaKnown RBP13.88□□□□□ -0.19
SRSF1-205ENST00000582730 VAPBO95292 243 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 CCNCP24863 283 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 TRIM71Q2Q1W2 868 aaKnown RBP13.88□□□□□ -0.19
SRSF1-205ENST00000582730 DCP1BQ8IZD4 617 aaKnown RBP13.88□□□□□ -0.19
SRSF1-205ENST00000582730 ABI1Q8IZP0 508 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 SERPINB11Q96P15 392 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 TBC1D13Q9NVG8 400 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 GMIPQ9P107 970 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 FGF10O15520 208 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-205ENST00000582730 TIMM44O43615 452 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 PSMG1O95456 288 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 HLA-DQB2P05538 268 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 C2P06681 752 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 GLRBP48167 497 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 ERFP50548 548 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 USP10Q14694 798 aaKnown RBP13.88□□□□□ -0.19
SRSF1-205ENST00000582730 CTXN3Q4LDR2 81 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 SLC25A41Q8N5S1 370 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 ZSCAN18Q8TBC5 510 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-205ENST00000582730 WDR60Q8WVS4 1066 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 GATA6Q92908 595 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 SCYL1Q96KG9 808 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 UNKQ9C0B0 810 aaKnown RBP13.88□□□□□ -0.19
SRSF1-205ENST00000582730 TAS2R1Q9NYW7 299 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 TLK1Q9UKI8 766 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 ADAM28Q9UKQ2 775 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 NEU3Q9UQ49 428 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 MAFKO60675 156 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 ANXA9O76027 345 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 TBX18O95935 607 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 CHRNA4P43681 627 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 USP46P62068 366 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 SP3Q02447 781 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 CTBP1Q13363 440 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 MBTPS1Q14703 1052 aa13.88□□□□□ -0.19
SRSF1-205ENST00000582730 GRM3Q14832 879 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms