RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 MIS12Q9H081 205 aa12.88□□□□□ -0.35
CSNK1D-218ENST00000581655 ADNPQ9H2P0 1102 aa12.88□□□□□ -0.35
CSNK1D-218ENST00000581655 TCEAL2Q9H3H9 227 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-218ENST00000581655 LRRC4CQ9HCJ2 640 aa12.88□□□□□ -0.35
CSNK1D-218ENST00000581655 DYRK4Q9NR20 520 aa12.88□□□□□ -0.35
CSNK1D-218ENST00000581655 RAB20Q9NX57 234 aa12.88□□□□□ -0.35
CSNK1D-218ENST00000581655 NAALADL1Q9UQQ1 740 aa12.88□□□□□ -0.35
CSNK1D-218ENST00000581655 RP1L1Q8IWN7 2480 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-218ENST00000581655 LRRK1Q38SD2 2015 aa12.88□□□□□ -0.35
CSNK1D-218ENST00000581655 PRAMEF33A0A0G2JMD5 474 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 TCAF2A6NFQ2 919 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 D6RAR5 112 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 F5H5T6 163 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 SPINT1O43278 529 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 PRAMEF10O60809 474 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 PPP6R2O75170 966 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 ANXA6P08133 673 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 VDRP11473 427 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 ITIH1P19827 911 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 SYT1P21579 422 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 NR2F2P24468 414 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 CASRP41180 1078 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 RABIFP47224 123 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 MXI1P50539 228 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 NCAPHQ15003 741 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 ZC3H12AQ5D1E8 599 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 PRRT3Q5FWE3 981 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 ERN2Q76MJ5 926 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 TAC4Q86UU9 113 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 SH2D3CQ8N5H7 860 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 FBXL13Q8NEE6 735 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 OR52K2Q8NGK3 314 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 BTN2A2Q8WVV5 523 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 GFM1Q96RP9 751 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 SPASTQ9UBP0 616 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 APOBEC3BQ9UH17 382 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 TRAF3IP3Q9Y228 551 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 PCDHB11Q9Y5F2 797 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 CENPEQ02224 2701 aa12.87□□□□□ -0.35
CSNK1D-218ENST00000581655 ABCA12Q86UK0 2595 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 DOPEY1Q5JWR5 2465 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 LMO7DNF2Z398 122 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 TMX2-CTNND1H3BSU7 103 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 CUTAO60888 179 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 SRCP12931 536 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 GTF2H1P32780 548 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 OXCT1P55809 520 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 RPS21P63220 83 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 CCL7P80098 99 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 KCNAB2Q13303 367 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 ESRP1Q6NXG1 681 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 LCLAT1Q6UWP7 414 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 SDR16C5Q8N3Y7 309 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 TMIEQ8NEW7 156 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 OR2A12Q8NGT7 310 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 TFAP2BQ92481 460 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 FAM149B1Q96BN6 582 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 BTN2A3PQ96KV6 586 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 FEM1AQ9BSK4 669 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 GULP1Q9UBP9 304 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 VPS28Q9UK41 221 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 LOXL2Q9Y4K0 774 aa12.86□□□□□ -0.35
CSNK1D-218ENST00000581655 A0A1W2PQM1 296 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 FPGTO14772 594 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 YY2O15391 372 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 FBXO21O94952 628 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 MT-CO1P00395 513 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 RPLP0P05388 317 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 CCKBRP32239 447 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 NOS2P35228 1153 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 PSMC2P35998 433 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 ETV5P41161 510 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 POLE2P56282 527 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 CENPCQ03188 943 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 ENPEPQ07075 957 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 CUL2Q13617 745 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 RABGAP1LQ5R372 815 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 SYPL2Q5VXT5 272 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 KIAA1161Q6NSJ0 714 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 BORAQ6PGQ7 559 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 DTX1Q86Y01 620 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 PHACTR4Q8IZ21 702 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 CHST14Q8NCH0 376 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 GRIN3AQ8TCU5 1115 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 CCDC74AQ96AQ1 378 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 CCDC114Q96M63 670 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 TMEM74Q96NL1 305 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 PPP1R9BQ96SB3 815 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 PRMT1Q99873 361 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 LRRC61Q9BV99 259 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 HDAC8Q9BY41 377 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 CPEB1Q9BZB8 566 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 CLPBQ9H078 707 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 FOXJ2Q9P0K8 574 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 ANAPC2Q9UJX6 822 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 PNMA8BQ9ULN7 279 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms