RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 NCAPGQ9BPX3 1015 aa25.41■■□□□ 1.66
CDC42EP4-205ENST00000580315 MAGEB5Q9BZ81 275 aa25.41■■□□□ 1.66
CDC42EP4-205ENST00000580315 FARP1Q9Y4F1 1045 aaPredicted RBP25.41■■□□□ 1.66
CDC42EP4-205ENST00000580315 LAMA5O15230 3695 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 METTL12A8MUP2 240 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 MID1O15344 667 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 CBFA2T3O75081 653 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 SEMA4FO95754 770 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 IL1BP01584 269 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 VAV1P15498 845 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 C5AR1P21730 350 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 EPHB2P29323 1055 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 HNRNPH3P31942 346 aaKnown RBP25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 ACSL1P33121 698 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 SLC20A2Q08357 652 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 DCAF12L1Q5VU92 463 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 PROSER1Q86XN7 944 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 VSTM4Q8IW00 320 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 PYROXD2Q8N2H3 581 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 IL21RQ9HBE5 538 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 ZNHIT6Q9NWK9 470 aaKnown RBP25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 DNAI1Q9UI46 699 aa25.4■■□□□ 1.66
CDC42EP4-205ENST00000580315 EIF3CLB5ME19 914 aaKnown RBP25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 ALOX15BO15296 676 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 BCAT2O15382 392 aaPredicted RBP25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 CREB3O43889 395 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 RNASEH2AO75792 299 aaKnown RBP25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 HTR7P34969 479 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 FAM46CQ5VWP2 391 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 ALKBH5Q6P6C2 394 aaKnown RBP25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 Q6ZVU0 165 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 OR8K1Q8NGG5 319 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 EIF3CQ99613 913 aaKnown RBP25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 MAGEH1Q9H213 219 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 CATSPERBQ9H7T0 1116 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 ARHGAP20Q9P2F6 1191 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 PCOLCE2Q9UKZ9 415 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 FZD4Q9ULV1 537 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 NEU3Q9UQ49 428 aa25.39■■□□□ 1.66
CDC42EP4-205ENST00000580315 A0A087X0T9 212 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 BNIP3LO60238 219 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 PRPSAP2O60256 369 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 RAMP2O60895 175 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 MT-CO1P00395 513 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 FAM228BP0C875 321 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 CCDC122Q5T0U0 273 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 LINGO4Q6UY18 593 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 GLRX5Q86SX6 157 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 DNAJC7Q99615 494 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 GAREM1Q9H706 876 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 DONSONQ9NYP3 566 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 HPCAL4Q9UM19 191 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 AP4E1Q9UPM8 1137 aa25.38■■□□□ 1.65
CDC42EP4-205ENST00000580315 CXorf51AA0A1B0GTR3 108 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 A0A1W2PP55 124 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 C1QTNF3-AMACRE9PGA6 284 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 MCF2LO15068 1137 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 FGF10O15520 208 aaPredicted RBP25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 GOT1P17174 413 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 GLDCP23378 1020 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 RECQLP46063 649 aaPredicted RBP25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 GEMIN4P57678 1058 aaKnown RBP25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 BNC1Q01954 994 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 ACAP1Q15027 740 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 ERMARDQ5T6L9 678 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 CCNI2Q6ZMN8 369 aaPredicted RBP25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 SLCO6A1Q86UG4 719 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 RTL3Q8N8U3 475 aaKnown RBP25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 C1orf216Q8TAB5 229 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 ARHGEF2Q92974 986 aaKnown RBP25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 ACE2Q9BYF1 805 aaPredicted RBP25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 TRIM7Q9C029 511 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 THAP2Q9H0W7 228 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 C6orf106Q9H6K1 298 aaPredicted RBP25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 NDFIP2Q9NV92 336 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 PCSK1NQ9UHG2 260 aa25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 EIF2B4Q9UI10 523 aaKnown RBP25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 APOBEC2Q9Y235 224 aaKnown RBP25.37■■□□□ 1.65
CDC42EP4-205ENST00000580315 LRRC72A6NJI9 287 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 K7ERQ8 282 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 ZMPSTE24O75844 475 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 ZNF883P0CG24 379 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 EIF4A3P38919 411 aaKnown RBP25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 SERPINH1P50454 418 aaKnown RBP25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 TPI1P60174 286 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 POLD3Q15054 466 aaPredicted RBP25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 C22orf39Q6P5X5 142 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 IL27RAQ6UWB1 636 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 SETD7Q8WTS6 366 aaKnown RBP25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 SNX19Q92543 992 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 CEP44Q9C0F1 390 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 NEUROG2Q9H2A3 272 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 DEF6Q9H4E7 631 aa25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 DHX35Q9H5Z1 703 aaKnown RBP25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 FNDC3AQ9Y2H6 1198 aaKnown RBP25.36■■□□□ 1.65
CDC42EP4-205ENST00000580315 SMAD6O43541 496 aaKnown RBP25.35■■□□□ 1.65
CDC42EP4-205ENST00000580315 CER1O95813 267 aa25.35■■□□□ 1.65
CDC42EP4-205ENST00000580315 MIPP30301 263 aa25.35■■□□□ 1.65
CDC42EP4-205ENST00000580315 ACVRL1P37023 503 aa25.35■■□□□ 1.65
CDC42EP4-205ENST00000580315 HLA-BQ31612 363 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms