RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 EMILIN2Q9BXX0 1053 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 POLR1EQ9GZS1 481 aaKnown RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 CRISPLD1Q9H336 500 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 CCSER2Q9H7U1 834 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 MANSC1Q9H8J5 431 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 RXFP1Q9HBX9 757 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 ARNT2Q9HBZ2 717 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 NT5MQ9NPB1 228 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 C20orf96Q9NUD7 363 aaPredicted RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 SEPT3Q9UH03 358 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 PLLPQ9Y342 182 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 RWDD3Q9Y3V2 267 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 NR2E3Q9Y5X4 410 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 TANC1Q9C0D5 1861 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 PLXNA3P51805 1871 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 ILVBLA1L0T0 632 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 ZBBXA8MT70 800 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 CXorf49A8MYA2 514 aaPredicted RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 KLF11O14901 512 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 PRAMEF11O60813 436 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 DCTN3O75935 186 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 EPOP01588 193 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 LRG1P02750 347 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 APOA4P06727 396 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 RHOCP08134 193 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 CSF2RAP15509 400 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 RPL17P18621 184 aaKnown RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 TYK2P29597 1187 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 CA8P35219 290 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 SERPINB8P50452 374 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 CORO7P57737 925 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 TWF1Q12792 350 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 SLC1A5Q15758 541 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 LRRC26Q2I0M4 334 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 CCDC153Q494R4 210 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 ADGRF1Q5T601 910 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 MROH9Q5TGP6 573 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 FAM117BQ6P1L5 589 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 TRMT10BQ6PF06 316 aaKnown RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 FOXR1Q6PIV2 292 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 C6orf89Q6UWU4 347 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 OTOP3Q7RTS5 596 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 DNAJB7Q7Z6W7 309 aaPredicted RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 KCNMB4Q86W47 210 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 PPP1R14CQ8TAE6 165 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 ZSCAN18Q8TBC5 510 aaPredicted RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 DIS3LQ8TF46 1054 aaKnown RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 MRPS31Q92665 395 aaKnown RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 PSMG2Q969U7 264 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 IFT43Q96FT9 208 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 HMCESQ96FZ2 354 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 IMP4Q96G21 291 aaKnown RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 SERAC1Q96JX3 654 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 SRPK1Q96SB4 655 aaKnown RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 TUBB6Q9BUF5 446 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 FAM96AQ9H5X1 160 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 MLXIPLQ9NP71 852 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 FGFR1OP2Q9NVK5 253 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 TLK1Q9UKI8 766 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 PHTF1Q9UMS5 762 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 ANKRD6Q9Y2G4 727 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 INSL6Q9Y581 213 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 MRPL42Q9Y6G3 142 aaKnown RBP11.3□□□□□ -0.6
SKA2-204ENST00000578519 USH1CQ9Y6N9 552 aa11.3□□□□□ -0.6
SKA2-204ENST00000578519 A0A1B0GVM2 712 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 TCAF2A6NFQ2 919 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 GOLGA8RI6L899 631 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 ADAM12O43184 909 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 COCHO43405 550 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 EDF1O60869 148 aaKnown RBP11.29□□□□□ -0.6
SKA2-204ENST00000578519 PMPCBO75439 489 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 RFPL1O75677 317 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 ATP5HO75947 161 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 CNTN5O94779 1100 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 PAPSS2O95340 614 aaPredicted RBP11.29□□□□□ -0.6
SKA2-204ENST00000578519 TGDSO95455 350 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 SEC24AO95486 1093 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 C1RP00736 705 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 IL1BP01584 269 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 C1QAP02745 245 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 HLA-DQB2P05538 268 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 ADH1AP07327 375 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 ITGA2BP08514 1039 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 SERPINF2P08697 491 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 CTSAP10619 480 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 MBL2P11226 248 aaPredicted RBP11.29□□□□□ -0.6
SKA2-204ENST00000578519 HMGA1P17096 107 aaKnown RBP11.29□□□□□ -0.6
SKA2-204ENST00000578519 HLA-DPA1P20036 260 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 CDC25CP30307 473 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 CORO1AP31146 461 aaKnown RBP11.29□□□□□ -0.6
SKA2-204ENST00000578519 SERPINH1P50454 418 aaKnown RBP11.29□□□□□ -0.6
SKA2-204ENST00000578519 KPNA2P52292 529 aaKnown RBP11.29□□□□□ -0.6
SKA2-204ENST00000578519 PRKAA2P54646 552 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 WNT3AP56704 352 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 GNA12Q03113 381 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 PPARDQ03181 441 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 QPCTQ16769 361 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 LACTB2Q53H82 288 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms