RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MED7O43513 233 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 NEBLO76041 1014 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 IGLV3-25P01717 112 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 HSP90AA1P07900 732 aaKnown RBP9.21□□□□□ -0.94
SMG6-218ENST00000575454 GLI1P08151 1106 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 MYF5P13349 255 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 BRD2P25440 801 aaKnown RBP9.21□□□□□ -0.94
SMG6-218ENST00000575454 CDH4P55283 916 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 GCNT1Q02742 428 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 DNM1Q05193 864 aaKnown RBP9.21□□□□□ -0.94
SMG6-218ENST00000575454 SRSF1Q07955 248 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMG6-218ENST00000575454 EIF4EBP2Q13542 120 aaPredicted RBP9.21□□□□□ -0.94
SMG6-218ENST00000575454 AUHQ13825 339 aaKnown RBP9.21□□□□□ -0.94
SMG6-218ENST00000575454 PTK2BQ14289 1009 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 FZD2Q14332 565 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 TMEM259Q4ZIN3 620 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 ZNF542PQ5EBM4 170 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 C6orf132Q5T0Z8 1188 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 ACBD5Q5T8D3 534 aaPredicted RBP9.21□□□□□ -0.94
SMG6-218ENST00000575454 ESRP1Q6NXG1 681 aaKnown RBP9.21□□□□□ -0.94
SMG6-218ENST00000575454 GUSBP11Q6P575 273 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 FOXR1Q6PIV2 292 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 C14orf80Q86SX3 495 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 TMEM110Q86TL2 294 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 CIR1Q86X95 450 aaPredicted RBP9.21□□□□□ -0.94
SMG6-218ENST00000575454 PPM1KQ8N3J5 372 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 OR2A12Q8NGT7 310 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 LMX1AQ8TE12 382 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 SLC35C1Q96A29 364 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 ARRDC3Q96B67 414 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 SGF29Q96ES7 293 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 PRR11Q96HE9 360 aaPredicted RBP9.21□□□□□ -0.94
SMG6-218ENST00000575454 TBATAQ96M53 351 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 NOX5Q96PH1 765 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 LENG8Q96PV6 779 aaPredicted RBP9.21□□□□□ -0.94
SMG6-218ENST00000575454 SEMA3CQ99985 751 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 ZSWIM1Q9BR11 485 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 SLC4A5Q9BY07 1137 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 STRADBQ9C0K7 418 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 FZD3Q9NPG1 666 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 STARD5Q9NSY2 213 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 DDIT4Q9NX09 232 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 SPASTQ9UBP0 616 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 TBC1D30Q9Y2I9 924 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 OR51B4Q9Y5P0 310 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 NUMA1Q14980 2115 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 A0A1W2PNU3 283 aaPredicted RBP9.2□□□□□ -0.94
SMG6-218ENST00000575454 RNF225M0QZC1 329 aaPredicted RBP9.2□□□□□ -0.94
SMG6-218ENST00000575454 TERTO14746 1132 aaKnown RBP9.2□□□□□ -0.94
SMG6-218ENST00000575454 PLD2O14939 933 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 MUSKO15146 869 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 AP1G1O43747 822 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 PAK4O96013 591 aaPredicted RBP9.2□□□□□ -0.94
SMG6-218ENST00000575454 CTSLP07711 333 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 SRCP12931 536 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 JUNDP17535 347 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 FMO5P49326 533 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 NEK3P51956 506 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 NDUFA8P51970 172 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 SNX16P57768 344 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 LRRC63Q05C16 580 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 SLC20A2Q08357 652 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 MAPK8IP2Q13387 824 aaPredicted RBP9.2□□□□□ -0.94
SMG6-218ENST00000575454 PDE1CQ14123 709 aaPredicted RBP9.2□□□□□ -0.94
SMG6-218ENST00000575454 SPIDRQ14159 915 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 DEFB133Q30KQ1 61 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 SEL1L3Q68CR1 1132 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 KRBA2Q6ZNG9 492 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 EXD3Q8N9H8 876 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 ZSCAN1Q8NBB4 408 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 SCG3Q8WXD2 468 aaKnown RBP9.2□□□□□ -0.94
SMG6-218ENST00000575454 ASB12Q8WXK4 309 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 LIN37Q96GY3 246 aaPredicted RBP9.2□□□□□ -0.94
SMG6-218ENST00000575454 BMFQ96LC9 184 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 SPATA32Q96LK8 384 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMG6-218ENST00000575454 BOCQ9BWV1 1114 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 WDR70Q9NW82 654 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 ASNSD1Q9NWL6 643 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 SEPT10Q9P0V9 454 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 IL36AQ9UHA7 158 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 ACSL6Q9UKU0 697 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 ZFR2Q9UPR6 939 aaKnown RBP9.2□□□□□ -0.94
SMG6-218ENST00000575454 CEP192Q8TEP8 1941 aa9.2□□□□□ -0.94
SMG6-218ENST00000575454 POM121BA6NF01 834 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 LMO7DNF2Z398 122 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 M0QYT0 321 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 TOR1BO14657 336 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 SUV39H1O43463 412 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 TSPAN6O43657 245 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 HSF2BPO75031 334 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 LEFTY1O75610 366 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 MT-CO1P00395 513 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 AFPP02771 609 aaKnown RBP9.19□□□□□ -0.94
SMG6-218ENST00000575454 CENPBP07199 599 aaPredicted RBP9.19□□□□□ -0.94
SMG6-218ENST00000575454 ANXA6P08133 673 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 ITGB7P26010 798 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 NUMBP49757 651 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 C5orf22Q49AR2 442 aa9.19□□□□□ -0.94
SMG6-218ENST00000575454 COBLL1Q53SF7 1204 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms