RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CEP70Q8NHQ1 597 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 ZFP28Q8NHY6 868 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 MIPOL1Q8TD10 442 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 WNT8BQ93098 351 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 DCPSQ96C86 337 aaKnown RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 PPP1R2P1Q96PQ5 205 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 PKP2Q99959 881 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 KIFC1Q9BW19 673 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 SNX25Q9H3E2 840 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 TASP1Q9H6P5 420 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 COPS7BQ9H9Q2 264 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 C20orf96Q9NUD7 363 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 SEPT10Q9P0V9 454 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 C9IYK1 514 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 XPOTO43592 962 aaKnown RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 LTFP02788 710 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 GJA9P57773 515 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 HPCAP84074 193 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 IRF9Q00978 393 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 PRPSAP1Q14558 356 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 PSMD5Q16401 504 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 MYLK3Q32MK0 819 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 FAM182AQ5T1J6 154 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 C9orf57Q5W0N0 161 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 HACD2Q6Y1H2 254 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 PIWIL4Q7Z3Z4 852 aaKnown RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 ZC3HC1Q86WB0 502 aaKnown RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 CHERPQ8IWX8 916 aaKnown RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 LILRA2Q8N149 483 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 MRPL1Q9BYD6 325 aaKnown RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 WDR55Q9H6Y2 383 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 RRN3Q9NYV6 651 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 AK5Q9Y6K8 562 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 DYTNA2CJ06 578 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 ASB14A6NK59 587 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 ZNF26P17031 533 aaPredicted RBP21.91■■□□□ 1.1
SPSB3-208ENST00000566339 GNL1P36915 607 aaPredicted RBP21.91■■□□□ 1.1
SPSB3-208ENST00000566339 MS4A2Q01362 244 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 CDH17Q12864 832 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 SEMA3BQ13214 749 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 KIZQ2M2Z5 673 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 OTUD1Q5VV17 481 aaPredicted RBP21.91■■□□□ 1.1
SPSB3-208ENST00000566339 CHSY3Q70JA7 882 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 EFCAB3Q8N7B9 438 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 HM13Q8TCT9 377 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 PTCD2Q8WV60 388 aaKnown RBP21.91■■□□□ 1.1
SPSB3-208ENST00000566339 ITFG2Q969R8 447 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 CCDC126Q96EE4 140 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 CNBD2Q96M20 576 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 HNRNPABQ99729 332 aaKnown RBP21.91■■□□□ 1.1
SPSB3-208ENST00000566339 MAGEB5Q9BZ81 275 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 UNC93B1Q9H1C4 597 aa21.91■■□□□ 1.1
SPSB3-208ENST00000566339 TCAF2A6NFQ2 919 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 ADM5C9JUS6 153 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 LGALS2P05162 132 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 CHRNGP07510 517 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 ENO3P13929 434 aaPredicted RBP21.9■■□□□ 1.1
SPSB3-208ENST00000566339 ALDH3B2P48448 385 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 TRIM25Q14258 630 aaKnown RBP21.9■■□□□ 1.1
SPSB3-208ENST00000566339 DEFB115Q30KQ5 88 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 CES3Q6UWW8 571 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 ERI1Q8IV48 349 aaKnown RBP21.9■■□□□ 1.1
SPSB3-208ENST00000566339 C7orf31Q8N865 590 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 BIRC8Q96P09 236 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 AGAP2Q99490 1192 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 EFHD1Q9BUP0 239 aa21.9■■□□□ 1.1
SPSB3-208ENST00000566339 IPO11Q9UI26 975 aaKnown RBP21.9■■□□□ 1.1
SPSB3-208ENST00000566339 A0A087X1B8 175 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 FAM155AB1AL88 458 aaPredicted RBP21.89■■□□□ 1.1
SPSB3-208ENST00000566339 PIRO00625 290 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 VAPBO95292 243 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 SBK3P0C264 359 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 ADORA2BP29275 332 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 EPHA3P29320 983 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 VEGFBP49765 207 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 TKTL1P51854 596 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 RHDQ02161 417 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 PTK2BQ14289 1009 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 KCTD2Q14681 263 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 PPM1LQ5SGD2 360 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 LRRC8EQ6NSJ5 796 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 PELI3Q8N2H9 469 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 EMID1Q96A84 441 aaPredicted RBP21.89■■□□□ 1.1
SPSB3-208ENST00000566339 PGAP3Q96FM1 320 aaPredicted RBP21.89■■□□□ 1.1
SPSB3-208ENST00000566339 PRPF18Q99633 342 aaKnown RBP21.89■■□□□ 1.1
SPSB3-208ENST00000566339 DUSP16Q9BY84 665 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 GRIP2Q9C0E4 1043 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 R3HDMLQ9H3Y0 253 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 TUBA8Q9NY65 449 aaPredicted RBP21.89■■□□□ 1.1
SPSB3-208ENST00000566339 HSFX1Q9UBD0 423 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 ZDHHC2Q9UIJ5 367 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 ACOT9Q9Y305 439 aa21.89■■□□□ 1.1
SPSB3-208ENST00000566339 COPG1Q9Y678 874 aaKnown RBP21.89■■□□□ 1.1
SPSB3-208ENST00000566339 CACNG3O60359 315 aa21.89■■□□□ 1.09
SPSB3-208ENST00000566339 ADRA1BP35368 520 aa21.89■■□□□ 1.09
SPSB3-208ENST00000566339 GALNT2Q10471 571 aa21.89■■□□□ 1.09
SPSB3-208ENST00000566339 GALNT1Q10472 559 aaPredicted RBP21.89■■□□□ 1.09
SPSB3-208ENST00000566339 DCTN2Q13561 401 aaKnown RBP21.89■■□□□ 1.09
SPSB3-208ENST00000566339 SQLEQ14534 574 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms