RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 K7ERQ8 282 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 RAD51BO15315 384 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 PCDH8O95206 1070 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 SLC2A3P11169 496 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 NFATC3Q12968 1075 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 COBLL1Q53SF7 1204 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 PERM1Q5SV97 790 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 DENND1BQ6P3S1 775 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 CHST14Q8NCH0 376 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 WDR36Q8NI36 951 aaKnown RBP20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 SLC17A9Q9BYT1 436 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 METTL14Q9HCE5 456 aaKnown RBP20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 STARD5Q9NSY2 213 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 CNTN6Q9UQ52 1028 aa20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 FARP1Q9Y4F1 1045 aaPredicted RBP20.23■□□□□ 0.83
RABGGTA-214ENST00000560163 TLN1Q9Y490 2541 aaKnown RBP20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 E5RJQ4 531 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 TPP1O14773 563 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 AQP9O43315 295 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 SMAD6O43541 496 aaKnown RBP20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 CLDN11O75508 207 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 TNFSF15O95150 251 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 PAK4O96013 591 aaPredicted RBP20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 CCR1P32246 355 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 C1QBPQ07021 282 aaKnown RBP20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 MEA1Q16626 185 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 TPRG1LQ5T0D9 272 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 XKR5Q6UX68 686 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 PTAR1Q7Z6K3 402 aaPredicted RBP20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 PARGQ86W56 976 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 MED15Q96RN5 788 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 KLF6Q99612 283 aaPredicted RBP20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 BOCQ9BWV1 1114 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 ATXN7L1Q9ULK2 861 aaPredicted RBP20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 VANGL2Q9ULK5 521 aa20.22■□□□□ 0.83
RABGGTA-214ENST00000560163 SPINT1O43278 529 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 NOBOXO60393 691 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 SNAP91O60641 907 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 PRNPP04156 253 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 ITGA2BP08514 1039 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 ITGB6P18564 788 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 GCNT1Q02742 428 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 DRAP1Q14919 205 aaPredicted RBP20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 DEFB133Q30KQ1 61 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 ZSCAN23Q3MJ62 389 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 ARSIQ5FYB1 569 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 CRTC1Q6UUV9 634 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 RRAGAQ7L523 313 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 C14orf80Q86SX3 495 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 LURAP1LQ8IV03 231 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 ARHGEF19Q8IW93 802 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 ATP11CQ8NB49 1132 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 RNF34Q969K3 372 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 SLC2A13Q96QE2 648 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 TRIM4Q9C037 500 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 FAM117AQ9C073 453 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 GOLPH3LQ9H4A5 285 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 HS3ST4Q9Y661 456 aa20.21■□□□□ 0.83
RABGGTA-214ENST00000560163 ZNF821O75541 412 aaPredicted RBP20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 RRM1P23921 792 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 RABIFP47224 123 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 RPS21P63220 83 aaKnown RBP20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 EIF2B5Q13144 721 aaKnown RBP20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 NR0B2Q15466 257 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 COLEC12Q5KU26 742 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 KIAA1161Q6NSJ0 714 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 FOXR1Q6PIV2 292 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 SNX21Q969T3 373 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 SPATA32Q96LK8 384 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 CCDC114Q96M63 670 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 KREMEN1Q96MU8 473 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 LENG8Q96PV6 779 aaPredicted RBP20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 DYRK4Q9NR20 520 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 DDIT4Q9NX09 232 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 IL36AQ9UHA7 158 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 VPS51Q9UID3 782 aa20.2■□□□□ 0.82
RABGGTA-214ENST00000560163 CCDC187A0A096LP49 1063 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 H3BM21 787 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 NTN3O00634 580 aaPredicted RBP20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 GCATO75600 419 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 CNTN5O94779 1100 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 ZNF202O95125 648 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 JUNDP17535 347 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 CDH4P55283 916 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 KRT83P78385 493 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 CDK17Q00537 523 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 SLC35F3Q8IY50 421 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 DEFB106AQ8N104 65 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 WDR48Q8TAF3 677 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 LMX1AQ8TE12 382 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 FEM1CQ96JP0 617 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 TSG101Q99816 390 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 MUC3BQ9H195 1237 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 FAM204AQ9H8W3 233 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 PCDHGA7Q9Y5G6 932 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 FADS3Q9Y5Q0 445 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 HEMK1Q9Y5R4 338 aaPredicted RBP20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 WASF2Q9Y6W5 498 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 RELNP78509 3460 aa20.19■□□□□ 0.82
RABGGTA-214ENST00000560163 TRIM49BA6NDI0 452 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms