RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 DNAJB5O75953 348 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 KIF20AO95235 890 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 ADH1BP00325 375 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 F9P00740 461 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 IL1BP01584 269 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 PRLRP16471 622 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 JUNDP17535 347 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 TNNI1P19237 187 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 MAP4P27816 1152 aaKnown RBP9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 NUMBP49757 651 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 CASP5P51878 434 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 ITGA1P56199 1179 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 CDK18Q07002 472 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 FOXD4Q12950 439 aaPredicted RBP9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 FZD2Q14332 565 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 ZNF630Q2M218 657 aaPredicted RBP9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 EFHC2Q5JST6 749 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 MIIPQ5JXC2 388 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 Q6ZSR6 202 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 WDR49Q8IV35 697 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 NLGN4XQ8N0W4 816 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 C12orf29Q8N999 325 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 NLGN4YQ8NFZ3 816 aaPredicted RBP9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 TMA16Q96EY4 203 aaKnown RBP9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 C14orf79Q96F83 325 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 FAM129BQ96TA1 746 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 SLC25A23Q9BV35 468 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 STRA6Q9BX79 667 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 SDCBP2Q9H190 292 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 CSNK1G1Q9HCP0 422 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 MARCH2Q9P0N8 246 aa9.61□□□□□ -0.87
PPP1R3E-204ENST00000559942 TRPM6Q9BX84 2022 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 ZSCAN5CA6NGD5 496 aaPredicted RBP9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 PLRG1O43660 514 aaKnown RBP9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 ANXA6P08133 673 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 FAM163BP0C2L3 166 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 FAM200BP0CF97 657 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 FGF3P11487 239 aaPredicted RBP9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 AKT2P31751 481 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 DRD3P35462 400 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 UBA7P41226 1012 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 CSKP41240 450 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 CTSOP43234 321 aaPredicted RBP9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 ADKP55263 362 aaKnown RBP9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 CLDN2P57739 230 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 TRPC3Q13507 836 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 ERV3-1Q14264 604 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 SURF1Q15526 300 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 ARHGAP44Q17R89 818 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 CLEC20AQ6ZU45 233 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 KIAA0907Q7Z7F0 614 aaPredicted RBP9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 PARGQ86W56 976 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 SLITRK4Q8IW52 837 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 FAM217AQ8IXS0 508 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 FBXO18Q8NFZ0 1043 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 FGFBP2Q9BYJ0 223 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 MCCC2Q9HCC0 563 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 STIM2Q9P246 746 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 SPASTQ9UBP0 616 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 HMGXB4Q9UGU5 601 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 KLF15Q9UIH9 416 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 PILRAQ9UKJ1 303 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 STRIP2Q9ULQ0 834 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 KIF3AQ9Y496 699 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 PKD1L1Q8TDX9 2849 aa9.6□□□□□ -0.87
PPP1R3E-204ENST00000559942 AKAP6Q13023 2319 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 SPTY2D1-AS1A0A0U1RR47 76 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 KCNN4O15554 427 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 DPM1O60762 260 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 GCATO75600 419 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 MZF1P28698 734 aaPredicted RBP9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 TLE4Q04727 773 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 ABHD18Q0P651 414 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 C1orf61Q13536 156 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 OR6B2Q6IFH4 312 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 RFWD3Q6PCD5 774 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 BNC2Q6ZN30 1099 aaPredicted RBP9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 KDELC2Q7Z4H8 507 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 PTAR1Q7Z6K3 402 aaPredicted RBP9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 ABI3BPQ7Z7G0 1075 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 CCNJLQ8IV13 435 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 APLFQ8IW19 511 aaPredicted RBP9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 CISD2Q8N5K1 135 aaKnown RBP9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 Q8N9G6 341 aaPredicted RBP9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 CCDC112Q8NEF3 446 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 SPDYE1Q8NFV5 336 aaPredicted RBP9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 CHTF18Q8WVB6 975 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 LARP4BQ92615 738 aaKnown RBP9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 PNPLA2Q96AD5 504 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 CCDC127Q96BQ5 260 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 ARSGQ96EG1 525 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 MRGPRX3Q96LB0 322 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 CGRRF1Q99675 332 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 DDA1Q9BW61 102 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 ASPSCR1Q9BZE9 553 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 IPO11Q9UI26 975 aaKnown RBP9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 OSGIN2Q9Y236 505 aa9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 MRPS18BQ9Y676 258 aaKnown RBP9.59□□□□□ -0.87
PPP1R3E-204ENST00000559942 EDDM13A0A1B0GTR0 161 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms