RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZC3H10Q96K80 434 aaKnown RBP7.67□□□□□ -1.18
SPG11-213ENST00000558988 XPO6Q96QU8 1125 aaKnown RBP7.67□□□□□ -1.18
SPG11-213ENST00000558988 DUSP16Q9BY84 665 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 FSCN3Q9NQT6 498 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.67□□□□□ -1.18
SPG11-213ENST00000558988 COMMD8Q9NX08 183 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 IL37Q9NZH6 218 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 HESX1Q9UBX0 185 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 TCFL5Q9UL49 500 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 STRIP2Q9ULQ0 834 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 PCDHGA5Q9Y5G8 931 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 USP34Q70CQ2 3546 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 VPS13AQ96RL7 3174 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 NUP205Q92621 2012 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 NCOR2Q9Y618 2525 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 FAM92AA1XBS5 289 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 FADS2P1A8MWK0 482 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 WASH3PC4AMC7 463 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 TULP2O00295 520 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 PSMA7O14818 248 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 TSPAN3O60637 253 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 STC2O76061 302 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 LCP1P13796 627 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 GABRG2P18507 467 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 NTSR1P30989 418 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 GTF2H1P32780 548 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 PTGER3P43115 390 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 TNFRSF4P43489 277 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 MAPKAPK2P49137 400 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 RGS7P49802 495 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 NOVA1P51513 510 aaKnown RBP7.66□□□□□ -1.18
SPG11-213ENST00000558988 TKTL1P51854 596 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 STX17P56962 302 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 YWHAGP61981 247 aaKnown RBP eCLIP7.66□□□□□ -1.18
SPG11-213ENST00000558988 FKBP3Q00688 224 aaKnown RBP7.66□□□□□ -1.18
SPG11-213ENST00000558988 RPL6Q02878 288 aaKnown RBP7.66□□□□□ -1.18
SPG11-213ENST00000558988 ADIGQ0VDE8 80 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 CUL2Q13617 745 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 SEPT6Q14141 434 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 PREPLQ4J6C6 727 aaPredicted RBP7.66□□□□□ -1.18
SPG11-213ENST00000558988 TRIM61Q5EBN2 209 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 N4BP2L1Q5TBK1 243 aaPredicted RBP7.66□□□□□ -1.18
SPG11-213ENST00000558988 SNX30Q5VWJ9 437 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 KIAA1211LQ6NV74 962 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 HTR3DQ70Z44 454 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 CCDC186Q7Z3E2 898 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 TRMT11Q7Z4G4 463 aaKnown RBP7.66□□□□□ -1.18
SPG11-213ENST00000558988 TADA2BQ86TJ2 420 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 DENND1CQ8IV53 801 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 SIX6OS1Q8N1H7 587 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 UBA3Q8TBC4 463 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 TMEM174Q8WUU8 243 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 KREMEN1Q96MU8 473 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 IPO9Q96P70 1041 aaKnown RBP7.66□□□□□ -1.18
SPG11-213ENST00000558988 GTPBP2Q9BX10 602 aaKnown RBP7.66□□□□□ -1.18
SPG11-213ENST00000558988 ULBP1Q9BZM6 244 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 LRRC4Q9HBW1 653 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 MARCH2Q9P0N8 246 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 CALCOCO1Q9P1Z2 691 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 WDR35Q9P2L0 1181 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 ARMCX3Q9UH62 379 aaPredicted RBP7.66□□□□□ -1.18
SPG11-213ENST00000558988 HOOK1Q9UJC3 728 aaKnown RBP7.66□□□□□ -1.18
SPG11-213ENST00000558988 ADAM30Q9UKF2 790 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 PCDHB4Q9Y5E5 795 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 ZNF292O60281 2723 aa7.66□□□□□ -1.18
SPG11-213ENST00000558988 LNP1A1A4G5 178 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 PRRT4C9JH25 899 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 GIPC1O14908 333 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 SLC16A3O15427 465 aaKnown RBP7.65□□□□□ -1.18
SPG11-213ENST00000558988 MSI1O43347 362 aaKnown RBP7.65□□□□□ -1.18
SPG11-213ENST00000558988 CACNG3O60359 315 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 GREM1O60565 184 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 ZBED1O96006 694 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 KLKB1P03952 638 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 P2RY2P41231 377 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 BCAT1P54687 386 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 YWHAEP62258 255 aaKnown RBP7.65□□□□□ -1.18
SPG11-213ENST00000558988 IRX4P78413 519 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 NUCB2P80303 420 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 GON4LQ3T8J9 2241 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 LYSMD4Q5XG99 296 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 TMEM270Q6UE05 265 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 C11orf74Q86VG3 221 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 PPM1KQ8N3J5 372 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 KIAA1958Q8N8K9 716 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 ENOX1Q8TC92 643 aaKnown RBP7.65□□□□□ -1.18
SPG11-213ENST00000558988 DDI1Q8WTU0 396 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 RNF139Q8WU17 664 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 NELFBQ8WX92 580 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 SORCS1Q8WY21 1168 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 KAT5Q92993 513 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 GSDMAQ96QA5 445 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 HDAC8Q9BY41 377 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 CIPCQ9C0C6 399 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 PNPLA8Q9NP80 782 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 CD93Q9NPY3 652 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 TMEM9BQ9NQ34 198 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 TNFRSF10DQ9UBN6 386 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 SFMBT1Q9UHJ3 866 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 MAN1B1Q9UKM7 699 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms