RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RABGEF1Q9UJ41 708 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-204ENST00000553605 MORC2Q9Y6X9 1032 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-204ENST00000553605 ITPR2Q14571 2701 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 A0A1W2PQM1 296 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 AGRPO00253 132 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 PIK3R2O00459 728 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 FPGTO14772 594 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 RPLP0P05388 317 aaKnown RBP14.14□□□□□ -0.15
PRPF39-204ENST00000553605 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 SETSIPP0DME0 302 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 CD82P27701 267 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 CHRNA3P32297 505 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 ETV5P41161 510 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 OXCT1P55809 520 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 RPS21P63220 83 aaKnown RBP14.14□□□□□ -0.15
PRPF39-204ENST00000553605 NNTQ13423 1086 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 TPRG1LQ5T0D9 272 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 ERN2Q76MJ5 926 aaKnown RBP14.14□□□□□ -0.15
PRPF39-204ENST00000553605 SDR16C5Q8N3Y7 309 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 SH2D3CQ8N5H7 860 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 TMIEQ8NEW7 156 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 CCDC74AQ96AQ1 378 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 TMEM159Q96B96 161 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 FEM1CQ96JP0 617 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 CPEB1Q9BZB8 566 aaKnown RBP14.14□□□□□ -0.15
PRPF39-204ENST00000553605 KCTD10Q9H3F6 313 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 TCEAL2Q9H3H9 227 aaPredicted RBP14.14□□□□□ -0.15
PRPF39-204ENST00000553605 TMPRSS4Q9NRS4 437 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 LRRK1Q38SD2 2015 aa14.14□□□□□ -0.15
PRPF39-204ENST00000553605 SCN8AQ9UQD0 1980 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 C9orf172C9J069 976 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 F5H5T6 163 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 RNF103O00237 685 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 PDXKO00764 312 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 GABBR2O75899 941 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 CD97P48960 835 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 RGS7P49802 495 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 MAPK10P53779 464 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 CXorf57Q6NSI4 855 aaKnown RBP14.13□□□□□ -0.15
PRPF39-204ENST00000553605 KIAA1161Q6NSJ0 714 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 CIR1Q86X95 450 aaPredicted RBP14.13□□□□□ -0.15
PRPF39-204ENST00000553605 C9orf43Q8TAL5 461 aaPredicted RBP14.13□□□□□ -0.15
PRPF39-204ENST00000553605 DQX1Q8TE96 717 aaKnown RBP14.13□□□□□ -0.15
PRPF39-204ENST00000553605 CLEC4CQ8WTT0 213 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 JPH3Q8WXH2 748 aaPredicted RBP14.13□□□□□ -0.15
PRPF39-204ENST00000553605 SEMA4DQ92854 862 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 ALG14Q96F25 216 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 CCDC114Q96M63 670 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 USP28Q96RU2 1077 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 FEM1AQ9BSK4 669 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 LRRC61Q9BV99 259 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 HDAC8Q9BY41 377 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 CLPBQ9H078 707 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 LRRN3Q9H3W5 708 aa14.13□□□□□ -0.15
PRPF39-204ENST00000553605 CACNA1DQ01668 2161 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-204ENST00000553605 MAPK13O15264 365 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 MTSS1O43312 755 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 AGFG2O95081 481 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 APOEP02649 317 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 PRNPP04156 253 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 FYNP06241 537 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 PDIA4P13667 645 aaKnown RBP14.12□□□□□ -0.15
PRPF39-204ENST00000553605 CD19P15391 556 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 TSHRP16473 764 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 STK4Q13043 487 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 CUL4BQ13620 913 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 PTK2BQ14289 1009 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 PMF1Q6P1K2 205 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 INTS8Q75QN2 995 aaKnown RBP14.12□□□□□ -0.15
PRPF39-204ENST00000553605 PHACTR4Q8IZ21 702 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 ARL10Q8N8L6 244 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 OR2A12Q8NGT7 310 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 SLC35F5Q8WV83 523 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 BTN2A3PQ96KV6 586 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 TBATAQ96M53 351 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 LENG8Q96PV6 779 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-204ENST00000553605 KLF6Q99612 283 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-204ENST00000553605 CMKLR1Q99788 373 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 SLC13A1Q9BZW2 595 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 MAGEF1Q9HAY2 307 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 TMEM8AQ9HCN3 771 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 DOLKQ9UPQ8 538 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 NAALADL1Q9UQQ1 740 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 TRPM6Q9BX84 2022 aa14.12□□□□□ -0.15
PRPF39-204ENST00000553605 TCAF2A6NFQ2 919 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 O00370 1275 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 VDRP11473 427 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 SRCP12931 536 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 KRT13P13646 458 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 RIPPLY3P57055 190 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 PFN3P60673 137 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 ZFP36L1Q07352 338 aaKnown RBP14.11□□□□□ -0.15
PRPF39-204ENST00000553605 SGCGQ13326 291 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 ZC3H12AQ5D1E8 599 aaKnown RBP14.11□□□□□ -0.15
PRPF39-204ENST00000553605 ARSIQ5FYB1 569 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 FAXCQ5TGI0 409 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 TMEM164Q5U3C3 297 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 TTC39BQ5VTQ0 682 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms