RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 ERCC4Q92889 916 aaPredicted RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 CCDC97Q96F63 343 aaPredicted RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 IFT43Q96FT9 208 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 BTN2A3PQ96KV6 586 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 PSMB7Q99436 277 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 DUSP23Q9BVJ7 150 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 PLA2G2EQ9NZK7 142 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 ANKMY1Q9P2S6 941 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 UBR5O95071 2799 aaPredicted RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 CCDC187A0A096LP49 1063 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 TCAF2A6NFQ2 919 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 A6NNZ2 444 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 KCNU1A8MYU2 1149 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 AGRPO00253 132 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 AQP9O43315 295 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 FBXO21O94952 628 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 PAK4O96013 591 aaPredicted RBP8.68□□□□□ -1.02
CDK4-213ENST00000552713 APOEP02649 317 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 ITGA2BP08514 1039 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 PAEPP09466 180 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 JUNDP17535 347 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 RRM1P23921 792 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 GPD2P43304 727 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 RPL34P49207 117 aaKnown RBP8.68□□□□□ -1.02
CDK4-213ENST00000552713 HNRNPKP61978 463 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDK4-213ENST00000552713 CYP4F2P78329 520 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 NUCB2P80303 420 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 DPYDQ12882 1025 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 C1orf61Q13536 156 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 TAF5Q15542 800 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 DCAF17Q5H9S7 520 aaPredicted RBP8.68□□□□□ -1.02
CDK4-213ENST00000552713 TCERG1LQ5VWI1 586 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 NEK5Q6P3R8 708 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 USP53Q70EK8 1073 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 C14orf80Q86SX3 495 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 VASH2Q86V25 355 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 GUF1Q8N442 669 aaKnown RBP8.68□□□□□ -1.02
CDK4-213ENST00000552713 GRIN3AQ8TCU5 1115 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 LMX1AQ8TE12 382 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 SGF29Q96ES7 293 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 HSFY1Q96LI6 401 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 KLF6Q99612 283 aaPredicted RBP8.68□□□□□ -1.02
CDK4-213ENST00000552713 CCDC3Q9BQI4 270 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 BOCQ9BWV1 1114 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 RABGEF1Q9UJ41 708 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 SALL4Q9UJQ4 1053 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 SLC25A13Q9UJS0 675 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 KIAA1257Q9ULG3 409 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 PCDHB4Q9Y5E5 795 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 HS3ST3A1Q9Y663 406 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 CSNK1G3Q9Y6M4 447 aa8.68□□□□□ -1.02
CDK4-213ENST00000552713 SPTAN1Q13813 2472 aaKnown RBP8.68□□□□□ -1.02
CDK4-213ENST00000552713 SYNJ2BP-COX16A0A087WUM0 186 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 NTN3O00634 580 aaPredicted RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 PLD2O14939 933 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 ZNF821O75541 412 aaPredicted RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 TCEA3O75764 348 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 CNTN5O94779 1100 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 CELA2BP08218 269 aaPredicted RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 EPB41P11171 864 aaKnown RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 UGT1A5P35504 534 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 PMS1P54277 932 aaKnown RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 YWHAEP62258 255 aaKnown RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 LSM11P83369 360 aaKnown RBP eCLIP8.67□□□□□ -1.02
CDK4-213ENST00000552713 SPTBN1Q01082 2364 aaKnown RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 TLE1Q04724 770 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 DNM1Q05193 864 aaKnown RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 AUHQ13825 339 aaKnown RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 PKP1Q13835 747 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 PDE1CQ14123 709 aaPredicted RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 SPIDRQ14159 915 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 CLCA4Q14CN2 919 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 NR0B2Q15466 257 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 TBR1Q16650 682 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 EDRF1Q3B7T1 1238 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 DENND1BQ6P3S1 775 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 LINGO4Q6UY18 593 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 KYAT3Q6YP21 454 aaKnown RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 ZNF574Q6ZN55 896 aaPredicted RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 NYAP1Q6ZVC0 841 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 ERN2Q76MJ5 926 aaKnown RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 PARGQ86W56 976 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 JAMLQ86YT9 394 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 ATP6V0D2Q8N8Y2 350 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 TMIEQ8NEW7 156 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 TPCN2Q8NHX9 752 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 HTR3CQ8WXA8 447 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 GRAMD1AQ96CP6 724 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 PPP1R13BQ96KQ4 1090 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 RPRD1AQ96P16 312 aaPredicted RBP8.67□□□□□ -1.02
CDK4-213ENST00000552713 IL12RB2Q99665 862 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 ARHGAP9Q9BRR9 750 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 SLC17A9Q9BYT1 436 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 FOXP3Q9BZS1 431 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 CLPBQ9H078 707 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 TNKS2Q9H2K2 1166 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 SYNDIG1Q9H7V2 258 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 ST7Q9NRC1 585 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 EVA1BQ9NVM1 165 aa8.67□□□□□ -1.02
CDK4-213ENST00000552713 COX16Q9P0S2 106 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms