RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 PPP1R1BQ9UD71 204 aaPredicted RBP12.39□□□□□ -0.43
PRKCQ-203ENST00000539722 KLHL3Q9UH77 587 aa12.39□□□□□ -0.43
PRKCQ-203ENST00000539722 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 TMEM114B3SHH9 223 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 GPR25O00155 361 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 EXTL3O43909 919 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 USP12O75317 370 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 POLR2BP30876 1174 aaKnown RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 AVPR1AP37288 418 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 IFITM2Q01629 132 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 SLC13A2Q13183 592 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 SPPL2CQ8IUH8 684 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 TNIP2Q8NFZ5 429 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 TCF12Q99081 682 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 RIT2Q99578 217 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 DOK1Q99704 481 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 TARS2Q9BW92 718 aaKnown RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 MTMR12Q9C0I1 747 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 MRPL46Q9H2W6 279 aaKnown RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 SLC7A1P30825 629 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 GNL1P36915 607 aaPredicted RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 ARL1P40616 181 aaPredicted RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 SLC7A2P52569 658 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 PRKAA2P54646 552 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 CDH8P55286 799 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 PRPSAP1Q14558 356 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 AGKQ53H12 422 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 RPS27LQ71UM5 84 aaKnown RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 EXOC8Q8IYI6 725 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 ZFP90Q8TF47 636 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 APBB2Q92870 758 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 SH3YL1Q96HL8 342 aaPredicted RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 RNF157Q96PX1 679 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 OMDQ99983 421 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 BEGAINQ9BUH8 593 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 EFHD1Q9BUP0 239 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 MROQ9BYG7 248 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 RNF38Q9H0F5 515 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 MIR1-1HGQ9H1L0 117 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 TP63Q9H3D4 680 aaPredicted RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 RAD21L1Q9H4I0 556 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 SCHIP1Q9P0W5 487 aaPredicted RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 IPO11Q9UI26 975 aaKnown RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 VPS28Q9UK41 221 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 TCAF1Q9Y4C2 921 aa12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 RBBP6Q7Z6E9 1792 aaKnown RBP12.38□□□□□ -0.43
PRKCQ-203ENST00000539722 AP3B1O00203 1094 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 SNAP29O95721 258 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 MYF6P23409 242 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 TAZQ16635 292 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 KIZQ2M2Z5 673 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 PSD4Q8NDX1 1056 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 TMEM174Q8WUU8 243 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 SLC7A3Q8WY07 619 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 LRCH3Q96II8 777 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 OLFM1Q99784 485 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 FRMD8P1Q9BZ68 369 aaPredicted RBP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 LHPPQ9H008 270 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 IFT80Q9P2H3 777 aaPredicted RBP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 ARHGAP28Q9P2N2 729 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 GPSM3Q9Y4H4 160 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 SLC30A1Q9Y6M5 507 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 AXIN1O15169 862 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 PHGDHO43175 533 aaKnown RBP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 SYNCRIPO60506 623 aaKnown RBP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 CCNE2O96020 404 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 ENO2P09104 434 aaPredicted RBP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 TBXAS1P24557 533 aaPredicted RBP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 TNFSF9P41273 254 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 NUMBP49757 651 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 AQP6Q13520 282 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 MTMR1Q13613 665 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 PPP1R3AQ16821 1122 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 C6orf10Q5SRN2 563 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 UBE2UQ5VVX9 321 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 SH3BP5LQ7L8J4 393 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 ZBTB33Q86T24 672 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 CCDC60Q8IWA6 550 aaPredicted RBP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 CPXCR1Q8N123 301 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 PBXIP1Q96AQ6 731 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 ADNPQ9H2P0 1102 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 TASP1Q9H6P5 420 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 MFHAS1Q9Y4C4 1052 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 FAM155AB1AL88 458 aaPredicted RBP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 CLDN25C9JDP6 229 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 NFIBO00712 420 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 SNRPFP62306 86 aaKnown RBP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 NIPAL4Q0D2K0 466 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 APOBEC3HQ6NTF7 200 aaKnown RBP12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 SLC22A16Q86VW1 577 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 IFNEQ86WN2 208 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 HEATR4Q86WZ0 1026 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 DHFR2Q86XF0 187 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 PCDH19Q8TAB3 1148 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 UBA3Q8TBC4 463 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 ACMSDQ8TDX5 336 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 USP33Q8TEY7 942 aa12.37□□□□□ -0.43
PRKCQ-203ENST00000539722 TMEM143Q96AN5 459 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms