RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 F5H423 210 aaPredicted RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 GOLGA8MH3BSY2 632 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 MAP2K7O14733 419 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 MUSKO15146 869 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 PSMD3O43242 534 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 HOXC11O43248 304 aaPredicted RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 SUN1O94901 812 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 HLA-FP30511 346 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 GBP2P32456 591 aaPredicted RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 MMP13P45452 471 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 CDH18Q13634 790 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 PDGFRLQ15198 375 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 UAP1Q16222 522 aaPredicted RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 PLEKHG6Q3KR16 790 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 MSS51Q4VC12 460 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 INO80DQ53TQ3 878 aaPredicted RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 SYCP2LQ5T4T6 812 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 TMCO4Q5TGY1 634 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 GPR153Q6NV75 609 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 PARM1Q6UWI2 310 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 TMC3Q7Z5M5 1100 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 PRPF39Q86UA1 669 aaKnown RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 RELL1Q8IUW5 271 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 ARRDC2Q8TBH0 407 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 NSMCE1Q8WV22 266 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 MYLIPQ8WY64 445 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 TADA1Q96BN2 335 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 OXNAD1Q96HP4 312 aaPredicted RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 ZFYVE19Q96K21 471 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 NSMCE3Q96MG7 304 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 NECTIN4Q96NY8 510 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 CDX2Q99626 313 aaPredicted RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 RPP25Q9BUL9 199 aaKnown RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 TSPYL1Q9H0U9 437 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 EPB41L4BQ9H329 900 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 HPS4Q9NQG7 708 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 EIF2B3Q9NR50 452 aaKnown RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 THG1LQ9NWX6 298 aaKnown RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 EPS15L1Q9UBC2 864 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 UBA2Q9UBT2 640 aaPredicted RBP11.93□□□□□ -0.5
SPARC-207ENST00000537849 RSPH14Q9UHP6 348 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 VPS51Q9UID3 782 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 HPCAL4Q9UM19 191 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 ANKRD36A6QL64 1941 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 MIA3Q5JRA6 1907 aa11.93□□□□□ -0.5
SPARC-207ENST00000537849 C5orf42Q9H799 3197 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 H3BQ06 376 aaPredicted RBP11.92□□□□□ -0.5
SPARC-207ENST00000537849 CBX4O00257 560 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 TRIM24O15164 1050 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 ECI2O75521 394 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 AP2A1O95782 977 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 MT-CO1P00395 513 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 APRTP07741 180 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 MMP2P08253 660 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 GRIA1P42261 906 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 MAGEA4P43358 317 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 SLC20A2Q08357 652 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 RFTN1Q14699 578 aaPredicted RBP11.92□□□□□ -0.5
SPARC-207ENST00000537849 CASP8Q14790 479 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 SLMAPQ14BN4 828 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 CCDC85BQ15834 202 aaPredicted RBP11.92□□□□□ -0.5
SPARC-207ENST00000537849 ALG1LQ6GMV1 187 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 ZNF534Q76KX8 674 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 Q7L0L9 218 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 HDXQ7Z353 690 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 CCDC117Q8IWD4 279 aaPredicted RBP11.92□□□□□ -0.5
SPARC-207ENST00000537849 IQCKQ8N0W5 287 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.92□□□□□ -0.5
SPARC-207ENST00000537849 NAT16Q8N8M0 369 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 DCAF4L2Q8NA75 395 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 SPATA22Q8NHS9 363 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 FGF14Q92915 247 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 ACDQ96AP0 544 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 IMP4Q96G21 291 aaKnown RBP11.92□□□□□ -0.5
SPARC-207ENST00000537849 PSKH2Q96QS6 385 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 RBM15Q96T37 977 aaKnown RBP eCLIP11.92□□□□□ -0.5
SPARC-207ENST00000537849 FRMD8Q9BZ67 464 aaPredicted RBP11.92□□□□□ -0.5
SPARC-207ENST00000537849 SEMA4AQ9H3S1 761 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 EBF3Q9H4W6 596 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 ECT2Q9H8V3 914 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 ABCB8Q9NUT2 735 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 DNAJC17Q9NVM6 304 aaKnown RBP11.92□□□□□ -0.5
SPARC-207ENST00000537849 SEPT3Q9UH03 358 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 VPS28Q9UK41 221 aa11.92□□□□□ -0.5
SPARC-207ENST00000537849 CXorf51AA0A1B0GTR3 108 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 TTC24A2A3L6 582 aaPredicted RBP11.91□□□□□ -0.5
SPARC-207ENST00000537849 ERI2A8K979 691 aaKnown RBP11.91□□□□□ -0.5
SPARC-207ENST00000537849 E7EVH7 732 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 ANHXE9PGG2 379 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 EIF3HO15372 352 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPARC-207ENST00000537849 ATP8B1O43520 1251 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 AVILO75366 819 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 SASH3O75995 380 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 ANXA9O76027 345 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 NFATC1O95644 943 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 MT-CYBP00156 380 aaPredicted RBP11.91□□□□□ -0.5
SPARC-207ENST00000537849 ADH1CP00326 375 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 ADH5P11766 374 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 MLNP12872 115 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms