RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 IFT43Q96FT9 208 aa12.2□□□□□ -0.46
LINC01089-204ENST00000535643 NSL1Q96IY1 281 aa12.2□□□□□ -0.46
LINC01089-204ENST00000535643 ZFYVE19Q96K21 471 aa12.2□□□□□ -0.46
LINC01089-204ENST00000535643 BTBD6Q96KE9 485 aa12.2□□□□□ -0.46
LINC01089-204ENST00000535643 IKZF4Q9H2S9 585 aa12.2□□□□□ -0.46
LINC01089-204ENST00000535643 PCIF1Q9H4Z3 704 aa12.2□□□□□ -0.46
LINC01089-204ENST00000535643 DENND2DQ9H6A0 471 aaPredicted RBP12.2□□□□□ -0.46
LINC01089-204ENST00000535643 ACSS3Q9H6R3 686 aa12.2□□□□□ -0.46
LINC01089-204ENST00000535643 ETAA1Q9NY74 926 aa12.2□□□□□ -0.46
LINC01089-204ENST00000535643 WRAP73Q9P2S5 460 aaPredicted RBP12.2□□□□□ -0.46
LINC01089-204ENST00000535643 CNTN6Q9UQ52 1028 aa12.2□□□□□ -0.46
LINC01089-204ENST00000535643 R3HDM2Q9Y2K5 976 aaKnown RBP12.2□□□□□ -0.46
LINC01089-204ENST00000535643 A1L4Q6 167 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 DPPA5A6NC42 116 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 SIGLEC16A6NMB1 481 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 PDLIM1O00151 329 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 CSDE1O75534 798 aaKnown RBP12.19□□□□□ -0.46
LINC01089-204ENST00000535643 TBXAS1P24557 533 aaPredicted RBP12.19□□□□□ -0.46
LINC01089-204ENST00000535643 EPHB2P29323 1055 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 HNF1BP35680 557 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 P2RY2P41231 377 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 CCR2P41597 374 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 ARL4CP56559 192 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 CDK16Q00536 496 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 SLC34A1Q06495 639 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 TNK2Q07912 1038 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 AP1B1Q10567 949 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 TARDBPQ13148 414 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC01089-204ENST00000535643 SEPT7Q16181 437 aaKnown RBP12.19□□□□□ -0.46
LINC01089-204ENST00000535643 USP41Q3LFD5 358 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 GSTA5Q7RTV2 222 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 ARID3BQ8IVW6 561 aaPredicted RBP12.19□□□□□ -0.46
LINC01089-204ENST00000535643 KIRREL3Q8IZU9 778 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 ZSCAN18Q8TBC5 510 aaPredicted RBP12.19□□□□□ -0.46
LINC01089-204ENST00000535643 RAB3IL1Q8TBN0 382 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 C9orf72Q96LT7 481 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 CLSTN3Q9BQT9 956 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 NTPCRQ9BSD7 190 aaKnown RBP12.19□□□□□ -0.46
LINC01089-204ENST00000535643 FRMD8Q9BZ67 464 aaPredicted RBP12.19□□□□□ -0.46
LINC01089-204ENST00000535643 GPR62Q9BZJ7 368 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 MLXIPLQ9NP71 852 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 PAPOLBQ9NRJ5 636 aaKnown RBP12.19□□□□□ -0.46
LINC01089-204ENST00000535643 TMPRSS4Q9NRS4 437 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 DDX43Q9NXZ2 648 aaKnown RBP12.19□□□□□ -0.46
LINC01089-204ENST00000535643 TBK1Q9UHD2 729 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 TBX20Q9UMR3 447 aa12.19□□□□□ -0.46
LINC01089-204ENST00000535643 K7ENP7 123 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 SMIM24O75264 130 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 LSM8O95777 96 aaKnown RBP12.18□□□□□ -0.46
LINC01089-204ENST00000535643 CALB1P05937 261 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 DHRS4L1P0CG22 281 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 GM2AP17900 193 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 OR1G1P47890 313 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 PCBP4P57723 403 aaKnown RBP12.18□□□□□ -0.46
LINC01089-204ENST00000535643 NOMO3P69849 1222 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 OASLQ15646 514 aaKnown RBP12.18□□□□□ -0.46
LINC01089-204ENST00000535643 C6orf163Q5TEZ5 329 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 INO80CQ6PI98 192 aaPredicted RBP12.18□□□□□ -0.46
LINC01089-204ENST00000535643 LVRNQ6Q4G3 990 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 POLNQ7Z5Q5 900 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 ADGRG6Q86SQ4 1221 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 CPNE8Q86YQ8 564 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 GPD1LQ8N335 351 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 NIPA2Q8N8Q9 360 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 TMEM161BQ8NDZ6 487 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 URGCPQ8TCY9 931 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 KCNV2Q8TDN2 545 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 STMN2Q93045 179 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 SKA1Q96BD8 255 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 SLITRK1Q96PX8 696 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 PAIP2Q9BPZ3 127 aaKnown RBP12.18□□□□□ -0.46
LINC01089-204ENST00000535643 HERPUD2Q9BSE4 406 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 VPS37BQ9H9H4 285 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 GPAMQ9HCL2 828 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 PARVAQ9NVD7 372 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 NMRK1Q9NWW6 199 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 MKS1Q9NXB0 559 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
LINC01089-204ENST00000535643 MYH9P35579 1960 aaKnown RBP12.18□□□□□ -0.46
LINC01089-204ENST00000535643 IQANK1A0A1B0GTG1 560 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 GSC2O15499 205 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 KLK10O43240 276 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 MAP3K7O43318 606 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 SKAP2O75563 359 aaPredicted RBP12.17□□□□□ -0.46
LINC01089-204ENST00000535643 MICAL2O94851 1124 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 PSMG1O95456 288 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 POMCP01189 267 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 KRT5P13647 590 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 EIF4BP23588 611 aaKnown RBP12.17□□□□□ -0.46
LINC01089-204ENST00000535643 RPA3P35244 121 aaPredicted RBP12.17□□□□□ -0.46
LINC01089-204ENST00000535643 ARFIP2P53365 341 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 PSMC5P62195 406 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 SRSF11Q05519 484 aaKnown RBP12.17□□□□□ -0.46
LINC01089-204ENST00000535643 DMP1Q13316 513 aaPredicted RBP12.17□□□□□ -0.46
LINC01089-204ENST00000535643 PSMD6Q15008 389 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 TRIP13Q15645 432 aaPredicted RBP12.17□□□□□ -0.46
LINC01089-204ENST00000535643 SLC1A5Q15758 541 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 HIF1AQ16665 826 aa12.17□□□□□ -0.46
LINC01089-204ENST00000535643 TRMT5Q32P41 509 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms