RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 PTPN1P18031 435 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 CDH2P19022 906 aaPredicted RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 PGGT1BP53609 377 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 EN1Q05925 392 aaPredicted RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 GRM3Q14832 879 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 FAM219BQ5XKK7 198 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ZFP1Q6P2D0 407 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 TDRD5Q8NAT2 981 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 NETO2Q8NC67 525 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 SMG8Q8ND04 991 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 PIP4K2CQ8TBX8 421 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 SPPL2BQ8TCT7 592 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 SH3RF2Q8TEC5 729 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 TMEM40Q8WWA1 233 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 EZH1Q92800 747 aaPredicted RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 ASB9Q96DX5 294 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 MFSD3Q96ES6 412 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 PPP1R10Q96QC0 940 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 TTC1Q99614 292 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.49□□□□□ -1.69
CTSC-208ENST00000533897 CDH7Q9ULB5 785 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 TMCO1Q9UM00 188 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 GMEB1Q9Y692 573 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 CDY2AQ9Y6F7 541 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 CDY1Q9Y6F8 540 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 THSD7BQ9C0I4 1608 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 TRIM13O60858 407 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 CABYRO75952 493 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 AHSGP02765 367 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 POLBP06746 335 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 TFEBP19484 476 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 NMBRP28336 390 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 GARSP41250 739 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 NDUFV1P49821 464 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 GTF2A2P52657 109 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 PFKPQ01813 784 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 SULT2A1Q06520 285 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 DYNC1I2Q13409 638 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 CCDC6Q16204 474 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ARL13AQ5H913 290 aaPredicted RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 CNSTQ6PJW8 725 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 POTEAQ6S8J7 498 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 RASSF3Q86WH2 238 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 EPHX4Q8IUS5 362 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 FUNDC1Q8IVP5 155 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 DEFB106AQ8N104 65 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.49□□□□□ -1.69
CTSC-208ENST00000533897 C2CD4AQ8NCU7 369 aaPredicted RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 PPFIBP2Q8ND30 876 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 IL12RB2Q99665 862 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ANKRD60Q9BZ19 345 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 DHX35Q9H5Z1 703 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 WDR55Q9H6Y2 383 aaPredicted RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 NMRAL1Q9HBL8 299 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 NGRNQ9NPE2 291 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 FAM49BQ9NUQ9 324 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ARHGEF38Q9NXL2 777 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ATXN10Q9UBB4 475 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ZFC3H1O60293 1989 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 A0A096LPK6 155 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 HAS3O00219 553 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 PTGESO14684 152 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ACOX3O15254 700 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ZNF189O75820 626 aaPredicted RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 CIB2O75838 187 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 PRR35P0CG20 571 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 CYP2C9P11712 490 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ETS2P15036 469 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 KCNA5P22460 613 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 HADHAP40939 763 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ACADSBP45954 432 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 RPL5P46777 297 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 CXCR3P49682 368 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 RPL14P50914 215 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 NFKB2Q00653 900 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 RBBP5Q15291 538 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 PCBP1Q15365 356 aaKnown RBP eCLIP4.49□□□□□ -1.69
CTSC-208ENST00000533897 SEPT7Q16181 437 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 ZNF772Q68DY9 489 aaPredicted RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 FAM45BPQ6NSW5 357 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 CES3Q6UWW8 571 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 TMEM207Q6UWW9 146 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 LARP4Q71RC2 724 aaKnown RBP eCLIP4.49□□□□□ -1.693e-7■□□□□ 10.4
CTSC-208ENST00000533897 BEND5Q7L4P6 421 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 SPATA24Q86W54 205 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ANKFN1Q8N957 763 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 TXNDC5Q8NBS9 432 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 FAM45AQ8TCE6 357 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 DIS3LQ8TF46 1054 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 DLG3Q92796 817 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 VPS39Q96JC1 886 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 TEKT5Q96M29 485 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ZCWPW1Q9H0M4 648 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 LRRC40Q9H9A6 602 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 LRRC4Q9HBW1 653 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ARNT2Q9HBZ2 717 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 CRTAC1Q9NQ79 661 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 TCF7L2Q9NQB0 619 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ARMC1Q9NVT9 282 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms