RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SMG7Q92540 1137 aaKnown RBP5.32□□□□□ -1.56
CSDE1-212ENST00000529046 RITA1Q96K30 269 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 CINPQ9BW66 212 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-212ENST00000529046 CDCP1Q9H5V8 836 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 ABHD10Q9NUJ1 306 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 DAPP1Q9UN19 280 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 CNTN6Q9UQ52 1028 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 AKAP11Q9UKA4 1901 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 TISP43B9A030 160 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 POC1B-GALNT4F8VUJ3 575 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 SMIM22K7EJ46 135 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 SNAP23O00161 211 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 IPO5O00410 1097 aaKnown RBP5.31□□□□□ -1.56
CSDE1-212ENST00000529046 ACTL6BO94805 426 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 SFPQP23246 707 aaKnown RBP eCLIP5.31□□□□□ -1.56
CSDE1-212ENST00000529046 GALNSP34059 522 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 HALP42357 657 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 GSTM5P46439 218 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 RAE1P78406 368 aaKnown RBP5.31□□□□□ -1.56
CSDE1-212ENST00000529046 ARHGEF6Q15052 776 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 AAK1Q2M2I8 961 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 PRAMEF17Q5VTA0 474 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 RINT1Q6NUQ1 792 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 C16orf89Q6UX73 402 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 TTC30AQ86WT1 665 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 GALNT4Q8N4A0 578 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 MYCT1Q8N699 235 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 SPATA5Q8NB90 893 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 MAFAQ8NHW3 353 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-212ENST00000529046 ADAMTS18Q8TE60 1221 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 SLC22A17Q8WUG5 538 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 MCRS1Q96EZ8 462 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 ERO1AQ96HE7 468 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 FYTTD1Q96QD9 318 aaKnown RBP5.31□□□□□ -1.56
CSDE1-212ENST00000529046 NPAS1Q99742 590 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 GATA5Q9BWX5 397 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-212ENST00000529046 TWSG1Q9GZX9 223 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 MLXIPQ9HAP2 919 aa5.31□□□□□ -1.56
CSDE1-212ENST00000529046 ZNF70Q9UC06 446 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-212ENST00000529046 SSC5DA1L4H1 1573 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 WDR91A4D1P6 747 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 FCHO1O14526 889 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 NKX2-8O15522 239 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 LARGE1O95461 756 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 CYP3A4P08684 503 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 CAPN2P17655 700 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 ZNF81P51508 661 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 JAK3P52333 1124 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 COPB1P53618 953 aaKnown RBP5.3□□□□□ -1.56
CSDE1-212ENST00000529046 AP2B1P63010 937 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 NFRKBQ6P4R8 1299 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 LAS2Q8IYD9 372 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 GALNT15Q8N3T1 639 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 ANKRD44Q8N8A2 993 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 FAM71DQ8N9W8 422 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 SDCCAG3Q96C92 435 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 GCC1Q96CN9 775 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 SORBS1Q9BX66 1292 aaKnown RBP5.3□□□□□ -1.56
CSDE1-212ENST00000529046 C1QTNF7Q9BXJ2 289 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 SEMA4CQ9C0C4 833 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 USP44Q9H0E7 712 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 MYLK2Q9H1R3 596 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 VPS16Q9H269 839 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 BICC1Q9H694 974 aaKnown RBP5.3□□□□□ -1.56
CSDE1-212ENST00000529046 LRFN1Q9P244 771 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 GPR52Q9Y2T5 361 aa5.3□□□□□ -1.56
CSDE1-212ENST00000529046 RPAP1Q9BWH6 1393 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-212ENST00000529046 SALL1Q9NSC2 1324 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 CLRN2A0PK11 232 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 SLC38A8A6NNN8 435 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 EXOC3O60645 756 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 CIAO1O76071 339 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 IFIT1P09914 478 aaKnown RBP5.29□□□□□ -1.56
CSDE1-212ENST00000529046 EPHB2P29323 1055 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 GYG1P46976 350 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 RFX5P48382 616 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-212ENST00000529046 RBM5P52756 815 aaKnown RBP eCLIP5.29□□□□□ -1.56
CSDE1-212ENST00000529046 FOXL2P58012 376 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 TUBA4AP68366 448 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 SP3Q02447 781 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 TLE3Q04726 772 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 EFR3AQ14156 821 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 TMEM95Q3KNT9 176 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 PAPD7Q5XG87 772 aaKnown RBP5.29□□□□□ -1.56
CSDE1-212ENST00000529046 APOBEC3HQ6NTF7 200 aaKnown RBP5.29□□□□□ -1.56
CSDE1-212ENST00000529046 ZNF66Q6ZN08 573 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 RAB11FIP2Q7L804 512 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 C1QL2Q7Z5L3 287 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 CHSY1Q86X52 802 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 ERO1BQ86YB8 467 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 SPPL3Q8TCT6 385 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 ARHGAP45Q92619 1136 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 TEKT1Q969V4 418 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 OPTNQ96CV9 577 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 TRMT61AQ96FX7 289 aaKnown RBP5.29□□□□□ -1.56
CSDE1-212ENST00000529046 HIC2Q96JB3 615 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 CLMNQ96JQ2 1002 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 ZNF778Q96MU6 729 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 PUS3Q9BZE2 481 aaKnown RBP5.29□□□□□ -1.56
CSDE1-212ENST00000529046 ABHD16BQ9H3Z7 469 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms