RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 APEX1P27695 318 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 RPL10AP62906 217 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 SHC2P98077 582 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 MYL7Q01449 175 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 ADCY2Q08462 1091 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 SMARCB1Q12824 385 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 KLF1Q13351 362 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 KCNB1Q14721 858 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 MYBPC3Q14896 1274 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 RTP5Q14D33 572 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 PDCD1Q15116 288 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 STILQ15468 1287 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 NFE2Q16621 373 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 CCDC142Q17RM4 750 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 PLEKHG6Q3KR16 790 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 FBXO43Q4G163 708 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 USP39Q53GS9 565 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 ZNF385BQ569K4 471 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 PRAMEF9Q5VWM5 478 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 ANO7Q6IWH7 933 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 UNQ6494/PRO21346Q6UXR6 183 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 SYT13Q7L8C5 426 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 CXXC5Q7LFL8 322 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 KANSL1Q7Z3B3 1105 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 CXorf67Q86X51 503 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 SPATA2LQ8IUW3 424 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 CMIPQ8IY22 773 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 EFCAB13Q8IY85 973 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 PDCL2Q8N4E4 241 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 DEFB124Q8NES8 71 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 OSCP1Q8WVF1 389 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 PIGKQ92643 395 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 RAD54LQ92698 747 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 ATP2A3Q93084 1043 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 SAAL1Q96ER3 474 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 ZC3H10Q96K80 434 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 ZNF560Q96MR9 790 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 SLC22A12Q96S37 553 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 FAM213AQ9BRX8 229 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 OR10A5Q9H207 317 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 LINC00597Q9H2U6 94 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 ASB7Q9H672 318 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 KCND1Q9NSA2 647 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 BLOC1S4Q9NUP1 217 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 DDX43Q9NXZ2 648 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 TBC1D7Q9P0N9 293 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 UXTQ9UBK9 157 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 GTF3C4Q9UKN8 822 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 C2CD2Q9Y426 696 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 KIF3AQ9Y496 699 aa5.59□□□□□ -1.51
CTNNA1-239ENST00000523685 RALGAPA1Q6GYQ0 2036 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 PDCD11Q14690 1871 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 ATXN2Q99700 1313 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 CEP295Q9C0D2 2601 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 GABRDO14764 452 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 IL18RAPO95256 599 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 TSPAN15O95858 294 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 HDCP19113 662 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 GJB2P29033 226 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 DDIT3P35638 169 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 PNPLA4P41247 253 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 ZNF131P52739 623 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 PSMC1P62191 440 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 IRX4P78413 519 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 IL13RA1P78552 427 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 GTF2BQ00403 316 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 ZNF268Q14587 947 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 ZNF77Q15935 545 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 ARL6IP4Q66PJ3 421 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 LMBRD2Q68DH5 695 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 CRELD2Q6UXH1 353 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 SFR1Q86XK3 245 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 ADGRF2Q8IZF7 708 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 SYCP3Q8IZU3 236 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 DEFB119Q8N690 84 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 CSGALNACT2Q8N6G5 542 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 FSIP1Q8NA03 581 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 RLN3Q8WXF3 142 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 LARP4BQ92615 738 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 AK8Q96MA6 479 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 FIZ1Q96SL8 496 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 ACBD6Q9BR61 282 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 MRPL44Q9H9J2 332 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 ZDHHC4Q9NPG8 344 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 TMEM9BQ9NQ34 198 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 SMPD4Q9NXE4 827 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 BCCIPQ9P287 314 aaKnown RBP eCLIP5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 L1RE1Q9UN81 338 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 SPEF1Q9Y4P9 236 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 SNX9Q9Y5X1 595 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 CFAP47Q6ZTR5 3102 aa5.58□□□□□ -1.52
CTNNA1-239ENST00000523685 ATG2BQ96BY7 2078 aa5.57□□□□□ -1.52
CTNNA1-239ENST00000523685 CHD6Q8TD26 2715 aa5.57□□□□□ -1.52
CTNNA1-239ENST00000523685 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.57□□□□□ -1.52
CTNNA1-239ENST00000523685 PRSS38A1L453 326 aa5.57□□□□□ -1.52
CTNNA1-239ENST00000523685 MYMKA6NI61 221 aa5.57□□□□□ -1.52
CTNNA1-239ENST00000523685 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
CTNNA1-239ENST00000523685 K7EQS6 105 aa5.57□□□□□ -1.52
CTNNA1-239ENST00000523685 LEFTY2O00292 366 aa5.57□□□□□ -1.52
CTNNA1-239ENST00000523685 ATP2C2O75185 946 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms