RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 C17orf113A0A1B0GUU1 675 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 TCRBV5S2A0A599 114 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 SLC12A8A0AV02 714 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 A1L4Q6 167 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 CHADO15335 359 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 GAS7O60861 476 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 HSPA4LO95757 839 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 GNAI3P08754 354 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 ATP1A3P13637 1013 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 KLRC1P26715 233 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 HOXA13P31271 388 aaPredicted RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 GJA4P35212 333 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 TNNT3P45378 269 aaPredicted RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 NPTX2P47972 431 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 CSE1LP55060 971 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 DCAF7P61962 342 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 BNC1Q01954 994 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 OCRLQ01968 901 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 GFPT1Q06210 699 aaPredicted RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 DMTNQ08495 405 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 ZNF543Q08ER8 600 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 MRPL28Q13084 256 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 SCARB2Q14108 478 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 SPARCL1Q14515 664 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 USP39Q53GS9 565 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 CFAP58Q5T655 872 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 IFIT1BQ5T764 474 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 LYSMD4Q5XG99 296 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 TRIM68Q6AZZ1 485 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 MPZL3Q6UWV2 235 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 USP49Q70CQ1 688 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 MTERF4Q7Z6M4 381 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 PTRH1Q86Y79 214 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 SLC44A2Q8IWA5 706 aaPredicted RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 COLGALT2Q8IYK4 626 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 OR2C3Q8N628 320 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 RPLP0P6Q8NHW5 317 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 GSDMBQ8TAX9 411 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 SLC35G2Q8TBE7 412 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 SMARCD2Q92925 531 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 RBM18Q96H35 190 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 JAKMIP1Q96N16 626 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 TMEM209Q96SK2 561 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 LGMNQ99538 433 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 BAG1Q99933 345 aaPredicted RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 SDF4Q9BRK5 362 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 VPS11Q9H270 941 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 CPSF2Q9P2I0 782 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 PCDHA1Q9Y5I3 950 aa5.42□□□□□ -1.54
PABPC1-223ENST00000523636 ANK3Q12955 4377 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 DOCK9Q9BZ29 2069 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 A0A087WV62 115 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 ESYT2A0FGR8 921 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 TISP43B9A030 160 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 B9A039 149 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 INO80B-WBP1J3KQ70 363 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 PLOD2O00469 737 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 SLC27A2O14975 620 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 AP1G1O43747 822 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 CSDE1O75534 798 aaKnown RBP5.41□□□□□ -1.54
PABPC1-223ENST00000523636 REC8O95072 547 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 CLDN1O95832 211 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 P4HA1P13674 534 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 KRT15P19012 456 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 BTF3P20290 206 aaKnown RBP5.41□□□□□ -1.54
PABPC1-223ENST00000523636 PAX7P23759 505 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 CCND2P30279 289 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 CCT2P78371 535 aaKnown RBP5.41□□□□□ -1.54
PABPC1-223ENST00000523636 NUCB2P80303 420 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 PRR5P85299 388 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 TARDBPQ13148 414 aaKnown RBP eCLIP5.41□□□□□ -1.54
PABPC1-223ENST00000523636 ZNF267Q14586 743 aaPredicted RBP5.41□□□□□ -1.54
PABPC1-223ENST00000523636 MYBPC3Q14896 1274 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 SART3Q15020 963 aaKnown RBP5.41□□□□□ -1.54
PABPC1-223ENST00000523636 RABEP1Q15276 862 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 CCDC38Q502W7 563 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 SETMARQ53H47 684 aaPredicted RBP5.41□□□□□ -1.54
PABPC1-223ENST00000523636 RRP12Q5JTH9 1297 aaKnown RBP5.41□□□□□ -1.54
PABPC1-223ENST00000523636 DSTYKQ6XUX3 929 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 GALNTL5Q7Z4T8 443 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 SRGAP1Q7Z6B7 1085 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.41□□□□□ -1.54
PABPC1-223ENST00000523636 TMPRSS12Q86WS5 348 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 MIB1Q86YT6 1006 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 TMTC1Q8IUR5 882 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 NOSTRINQ8IVI9 506 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 DEFB119Q8N690 84 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 ESX1Q8N693 406 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 ZBTB34Q8NCN2 500 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 FAM156AQ8NDB6 213 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 CSGALNACT1Q8TDX6 532 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 FNIP1Q8TF40 1166 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 SEPT1Q8WYJ6 367 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 KIAA1191Q96A73 305 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 ZNF668Q96K58 619 aaPredicted RBP5.41□□□□□ -1.54
PABPC1-223ENST00000523636 AGAP3Q96P47 875 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 GAD1Q99259 594 aa5.41□□□□□ -1.54
PABPC1-223ENST00000523636 TMEM175Q9BSA9 504 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms