RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TCEAL4Q96EI5 215 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 EEF2KMTQ96G04 330 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 SENP8Q96LD8 212 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 NECTIN4Q96NY8 510 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 PYM1Q9BRP8 204 aaKnown RBP4.86□□□□□ -1.63
NUP54-206ENST00000508465 NDC1Q9BTX1 674 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 RPP25Q9BUL9 199 aaKnown RBP4.86□□□□□ -1.63
NUP54-206ENST00000508465 OSBPL2Q9H1P3 480 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 PLEKHA4Q9H4M7 779 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 TMEM206Q9H813 350 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 WDR6Q9NNW5 1121 aaKnown RBP4.86□□□□□ -1.63
NUP54-206ENST00000508465 OLFML3Q9NRN5 406 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 TRPM5Q9NZQ8 1165 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 DNMT3BQ9UBC3 853 aaKnown RBP4.86□□□□□ -1.63
NUP54-206ENST00000508465 UBQLN1Q9UMX0 589 aaKnown RBP4.86□□□□□ -1.63
NUP54-206ENST00000508465 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.86□□□□□ -1.63
NUP54-206ENST00000508465 CLCA2Q9UQC9 943 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 HPSEQ9Y251 543 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 DERAQ9Y315 318 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 FRYLO94915 3013 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 PTPRJQ12913 1337 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 VPS13AQ96RL7 3174 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 DOCK6Q96HP0 2047 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 PVALEFA0A1B0GWK0 134 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 TLDC2A0PJX2 215 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 GAGE12BA1L429 117 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 WDR27A2RRH5 827 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 GAGE12HA6NDE8 117 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 GOLGA6L4A6NEF3 574 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 KRTAP29-1A8MX34 341 aaPredicted RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 KPNA7A9QM74 516 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 M0QZQ0 153 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 SYN3O14994 580 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 XPOTO43592 962 aaKnown RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 HCRTO43612 131 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 ATP2C2O75185 946 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 ABLIM3O94929 683 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 OAZ2O95190 189 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 IL18RAPO95256 599 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 VNN2O95498 520 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 PDGFBP01127 241 aaPredicted RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 KRT19P08727 400 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 PDGFRBP09619 1106 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 HKR1P10072 659 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 DLATP10515 647 aaKnown RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 GJA1P17302 382 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 CYP3A5P20815 502 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 ACAT1P24752 427 aaKnown RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 ZFP36P26651 326 aaKnown RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 ABCD1P33897 745 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 NUCB2P80303 420 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 RBP5P82980 135 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 ROR1Q01973 937 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 YWHAHQ04917 246 aaPredicted RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 TWF1Q12792 350 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 PNOCQ13519 176 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 ALCAMQ13740 583 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 PTPN21Q16825 1174 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 KNOP1Q1ED39 458 aaKnown RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 FAM214AQ32MH5 1076 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 SDE2Q6IQ49 451 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 SLC8B1Q6J4K2 584 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 PDXDC1Q6P996 788 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 ABHD17CQ6PCB6 329 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 KRBA2Q6ZNG9 492 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 C15orf39Q6ZRI6 1047 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 CCDC149Q6ZUS6 474 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 STXBP4Q6ZWJ1 553 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 GET4Q7L5D6 327 aaPredicted RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 GDF7Q7Z4P5 450 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 LRRTM3Q86VH5 581 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 BRSK2Q8IWQ3 736 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 CD302Q8IX05 232 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 GPR65Q8IYL9 337 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 GPD1LQ8N335 351 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 SLC44A3Q8N4M1 653 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 KIAA0895Q8NCT3 520 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 CMASQ8NFW8 434 aaPredicted RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 OR10T2Q8NGX3 314 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 HDAC7Q8WUI4 952 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 MCRS1Q96EZ8 462 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 RTP3Q9BQQ7 232 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 C1QTNF1Q9BXJ1 281 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 MTMR12Q9C0I1 747 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 PIF1Q9H611 641 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 ASB7Q9H672 318 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 AKIP1Q9NQ31 210 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 AGPAT3Q9NRZ7 376 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 EXOC1Q9NV70 894 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 ZDHHC7Q9NXF8 308 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 SIRPGQ9P1W8 387 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 DPP7Q9UHL4 492 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 SIX4Q9UIU6 781 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 FBXW11Q9UKB1 542 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 ATP6V1DQ9Y5K8 247 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 TNPO3Q9Y5L0 923 aaKnown RBP4.85□□□□□ -1.63
NUP54-206ENST00000508465 PLXNA3P51805 1871 aa4.85□□□□□ -1.63
NUP54-206ENST00000508465 CITO14578 2027 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 VWA8A3KMH1 1905 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 CLUHO75153 1309 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms