RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 NAPEPLDQ6IQ20 393 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 RGS9BPQ6ZS82 235 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 CYS1Q717R9 158 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 YTHDF3Q7Z739 585 aaKnown RBP12.4□□□□□ -0.43
LIN54-206ENST00000506560 STRA8Q7Z7C7 330 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 ANKS4BQ8N8V4 417 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 OR7D4Q8NG98 312 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 RFWD2Q8NHY2 731 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 TMEM169Q96HH4 297 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 PRICKLE1Q96MT3 831 aaPredicted RBP12.4□□□□□ -0.43
LIN54-206ENST00000506560 NACA2Q9H009 215 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 NPHS2Q9NP85 383 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 DCTN4Q9UJW0 460 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 MTO1Q9Y2Z2 717 aaKnown RBP12.4□□□□□ -0.43
LIN54-206ENST00000506560 CAPN7Q9Y6W3 813 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 USP1O94782 785 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 ABLIM3O94929 683 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 GSRP00390 522 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 PSEN1P49768 467 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 WNT3AP56704 352 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 ZXDBP98169 803 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 PRPSAP1Q14558 356 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 KCNMB4Q86W47 210 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 DENND6AQ8IWF6 608 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 KLHDC8BQ8IXV7 354 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 PLD6Q8N2A8 252 aaKnown RBP12.39□□□□□ -0.43
LIN54-206ENST00000506560 DCLK2Q8N568 766 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 NSMCE3Q96MG7 304 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 SP110Q9HB58 689 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 OLA1Q9NTK5 396 aaKnown RBP12.39□□□□□ -0.43
LIN54-206ENST00000506560 PPARGC1AQ9UBK2 798 aaKnown RBP12.39□□□□□ -0.43
LIN54-206ENST00000506560 SOX13Q9UN79 622 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 BACE2Q9Y5Z0 518 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 ZFP37Q9Y6Q3 630 aaPredicted RBP12.39□□□□□ -0.43
LIN54-206ENST00000506560 CHD9Q3L8U1 2897 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 FAM237BA0A1B0GVD1 139 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 DRGXA6NNA5 263 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 ERI2A8K979 691 aaKnown RBP12.39□□□□□ -0.43
LIN54-206ENST00000506560 TSPAN3O60637 253 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 ALADP13716 330 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 GABRB3P28472 473 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 ATP5C1P36542 298 aaKnown RBP12.39□□□□□ -0.43
LIN54-206ENST00000506560 SCTRP47872 440 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 IRF9Q00978 393 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 TWF1Q12792 350 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 POLD3Q15054 466 aaPredicted RBP12.39□□□□□ -0.43
LIN54-206ENST00000506560 ATG14Q6ZNE5 492 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 TMEM150AQ86TG1 271 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 SPATS2Q86XZ4 545 aaKnown RBP12.39□□□□□ -0.43
LIN54-206ENST00000506560 CDKL2Q92772 493 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 ZNF558Q96NG5 402 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 IL22Q9GZX6 179 aa12.39□□□□□ -0.43
LIN54-206ENST00000506560 ZNF334Q9HCZ1 680 aaPredicted RBP12.39□□□□□ -0.43
LIN54-206ENST00000506560 AFF4Q9UHB7 1163 aaKnown RBP12.39□□□□□ -0.43
LIN54-206ENST00000506560 LTBP2Q14767 1821 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 RAMP2O60895 175 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 NEBLO76041 1014 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 HTR7P34969 479 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 CA8P35219 290 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 PDE1BQ01064 536 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 DSG1Q02413 1049 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 ZNF33AQ06730 810 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 CTBP1Q13363 440 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 LGSNQ5TDP6 509 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 FSTL4Q6MZW2 842 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 KDELC1Q6UW63 502 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 RNF135Q8IUD6 432 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 BHMTQ93088 406 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 NAT9Q9BTE0 207 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 FSD1LQ9BXM9 530 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 IQCGQ9H095 443 aaKnown RBP12.38□□□□□ -0.43
LIN54-206ENST00000506560 VPS11Q9H270 941 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 DNMT3LQ9UJW3 386 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 ARL2BPQ9Y2Y0 163 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 UNC80Q8N2C7 3258 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 ATXN2Q99700 1313 aaKnown RBP12.38□□□□□ -0.43
LIN54-206ENST00000506560 AURKAO14965 403 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 STC2O76061 302 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 VAPBO95292 243 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 NEFHP12036 1026 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 SAT1P21673 171 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 GP5P40197 560 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 NDST2P52849 883 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 MPP1Q00013 466 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 SMARCB1Q12824 385 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 SEPT6Q14141 434 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 CNGA3Q16281 694 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 N4BP2L1Q5TBK1 243 aaPredicted RBP12.38□□□□□ -0.43
LIN54-206ENST00000506560 FBXW10Q5XX13 1052 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 RANBP10Q6VN20 620 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 C16orf59Q7L2K0 433 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 CCNJLQ8IV13 435 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 C2orf15Q8WU43 125 aaKnown RBP12.38□□□□□ -0.43
LIN54-206ENST00000506560 C10orf82Q8WW14 230 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 MOCOSQ96EN8 888 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 SMIM14Q96QK8 99 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 KIFC1Q9BW19 673 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 ACSS2Q9NR19 701 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 TRIM33Q9UPN9 1127 aa12.38□□□□□ -0.43
LIN54-206ENST00000506560 AAR2Q9Y312 384 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms