RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 NCDNQ9UBB6 729 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 ZNF212Q9UDV6 495 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 VPS51Q9UID3 782 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 GMEB2Q9UKD1 530 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 SMG5Q9UPR3 1016 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 HS3ST2Q9Y278 367 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 INVSQ9Y283 1065 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 NCKAP1Q9Y2A7 1128 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 PCDHA13Q9Y5I0 950 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 ZDBF2Q9HCK1 2354 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 MYOFQ9NZM1 2061 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 ZNF318Q5VUA4 2279 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 ZSCAN5CA6NGD5 496 aaPredicted RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 LCE2BO14633 110 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 DCLK1O15075 740 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 SIN3BO75182 1162 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 MTA2O94776 668 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 NDUFA10O95299 355 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 RETP07949 1114 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 KRT7P08729 469 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 RARAP10276 462 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 SRCP12931 536 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 GOT1P17174 413 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 ERCC2P18074 760 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 IL1R2P27930 398 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 MAN1A1P33908 653 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 ACVRL1P37023 503 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 SLC1A1P43005 524 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 RECQLP46063 649 aaPredicted RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 SCTRP47872 440 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 NUMBP49757 651 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 STK19P49842 368 aaPredicted RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 CCDC15Q0P6D6 951 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 ELAVL3Q14576 367 aaKnown RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 TCEAL1Q15170 157 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 DPYSL2Q16555 572 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 LPAL2Q16609 132 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 CA9Q16790 459 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 SMTNL2Q2TAL5 461 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 PARP15Q460N3 678 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 PLK5Q496M5 336 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 TTC31Q49AM3 519 aaPredicted RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 ZFYVE27Q5T4F4 411 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 ARTNQ5T4W7 220 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 FAM46CQ5VWP2 391 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 DAB2IPQ5VWQ8 1189 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 ZNF776Q68DI1 518 aaPredicted RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 RFX8Q6ZV50 586 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 ASCL5Q7RTU5 278 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 KBTBD6Q86V97 674 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 UMODL1-AS1Q8N2C9 162 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 GPR161Q8N6U8 529 aaKnown RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 KCTD6Q8NC69 237 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 GANCQ8TET4 914 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 FRS2Q8WU20 508 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 RLN3Q8WXF3 142 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 OR8D1Q8WZ84 308 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 PTPRN2Q92932 1015 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 PEBP4Q96S96 227 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 PSMB7Q99436 277 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 DUSP15Q9H1R2 295 aaPredicted RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 SLC6A17Q9H1V8 727 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 RSPH9Q9H1X1 276 aaPredicted RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 OSGEPQ9NPF4 335 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.42□□□□□ -1.22
GYPB-206ENST00000506516 NDFIP2Q9NV92 336 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 CWC15Q9P013 229 aaKnown RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 CYP8B1Q9UNU6 501 aa7.42□□□□□ -1.22
GYPB-206ENST00000506516 NOVA2Q9UNW9 492 aaKnown RBP7.42□□□□□ -1.22
GYPB-206ENST00000506516 KIAA1549LQ6ZVL6 1849 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 A0A0A6YYK5 440 aaPredicted RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 IGHV1OR15-9A0A0B4J2B8 117 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 GOLGA6L3A6NEY3 463 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 ARHGAP42A6NI28 874 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 SOWAHDA6NJG2 315 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 TMEM110-MUSTN1A8MSY1 372 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 RASA4BC9J798 803 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 C1QTNF3-AMACRE9PGA6 284 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 MCF2LO15068 1137 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 ALOX15BO15296 676 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 RASA4O43374 803 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 BUB1O43683 1085 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 BNIP3LO60238 219 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 FOXD2O60548 495 aaPredicted RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 SNAP91O60641 907 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 LRP3O75074 770 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 ZMPSTE24O75844 475 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 MT-CO1P00395 513 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 IL1BP01584 269 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 C5AR1P21730 350 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 GLDCP23378 1020 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 CD6P30203 668 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 SLC8A1P32418 973 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 DPP6P42658 865 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 SERPINH1P50454 418 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 DNA2P51530 1060 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 TPMTP51580 245 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 NAP1L1P55209 391 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 CDH6P55285 790 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms