RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 GJB7Q6PEY0 223 aa17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 C14orf80Q86SX3 495 aa17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 CREBRFQ8IUR6 639 aa17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 PASD1Q8IV76 773 aa17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 PCDH20Q8N6Y1 951 aaKnown RBP17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 ZNF578Q96N58 590 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 PSMB7Q99436 277 aa17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 PDCL3Q9H2J4 239 aa17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 NLGN3Q9NZ94 848 aa17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 IL36AQ9UHA7 158 aa17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 DOCK9Q9BZ29 2069 aa17.22■□□□□ 0.35
TRAPPC3-207ENST00000497251 GCN1Q92616 2671 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 TEX51A0A1B0GUA7 166 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 A6NNZ2 444 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 FOXN3O00409 490 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 TRIM38O00635 465 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 ATXN7O15265 892 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 BNIP3LO60238 219 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 PIAS2O75928 621 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 PCDH8O95206 1070 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 ADCY5O95622 1261 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 MT-CO1P00395 513 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 CTSLP07711 333 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 MTIF2P46199 727 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 NEK3P51956 506 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 GEMIN4P57678 1058 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 DEUP1Q05D60 604 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 MAN2A1Q16706 1144 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 TBC1D25Q3MII6 688 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 TMEM259Q4ZIN3 620 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 SLC47A2Q86VL8 602 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 ASB12Q8WXK4 309 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 RAB7BQ96AH8 199 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 ISG20Q96AZ6 181 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 BBC3Q96PG8 261 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 PPARGC1AQ9UBK2 798 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 CSNK1G3Q9Y6M4 447 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 BPTFQ12830 3046 aa17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 FLNBO75369 2602 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-207ENST00000497251 SHROOM3Q8TF72 1996 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 MYLKQ15746 1914 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 SCAMP1O15126 338 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 TLX3O43711 291 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 LZTS3O60299 673 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 DXOO77932 396 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 CNTN5O94779 1100 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 ITGB7P26010 798 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 SULT1E1P49888 294 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 IRAK1P51617 712 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 UCNP55089 124 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 TPD52L1Q16890 204 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 POM121L1PQ3SYA9 428 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 ALFQ53S48 1182 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 C22orf39Q6P5X5 142 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 ERICH1Q86X53 443 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 IRF2BP1Q8IU81 584 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 TPCN2Q8NHX9 752 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 ARHGEF26Q96DR7 871 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 LENG8Q96PV6 779 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 DEPDC7Q96QD5 511 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 HEPHQ9BQS7 1158 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 SLC17A9Q9BYT1 436 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 GPR27Q9NS67 375 aa17.2■□□□□ 0.34
TRAPPC3-207ENST00000497251 H3BM21 787 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 TSPAN6O43657 245 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 BRINP1O60477 761 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 SNAP91O60641 907 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 SDC3O75056 442 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 RRM1P23921 792 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 L1CAMP32004 1257 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 RABIFP47224 123 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 SERPINH1P50454 418 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 ERVPABLB-1P60509 514 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 ARSIQ5FYB1 569 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 OTUD1Q5VV17 481 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 CDCP2Q5VXM1 449 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 KYAT3Q6YP21 454 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 DPY19L3Q6ZPD9 716 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 GPR155Q7Z3F1 870 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 ZNF248Q8NDW4 579 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 OR13H1Q8NG92 308 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 ARRDC3Q96B67 414 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 ZYG11BQ9C0D3 744 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 NDST4Q9H3R1 872 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 SIX2Q9NPC8 291 aa17.19■□□□□ 0.34
TRAPPC3-207ENST00000497251 A0A0D9SEW6 157 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 K7ERQ8 282 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 TPP1O14773 563 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 OPA1O60313 960 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 LEFTY1O75610 366 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 ZMPSTE24O75844 475 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 ADRB3P13945 408 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 CYP11B1P15538 503 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 PRLRP16471 622 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 ITPKBP27987 946 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 LSSP48449 732 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 RNASE9P60153 205 aaKnown RBP17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 NRG1Q02297 640 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 ARL13BQ3SXY8 428 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms