RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 GOLGA8KD6RF30 607 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 H3BM21 787 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ERVH48-1M5A8F1 160 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 GPR171O14626 319 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 TNPO2O14787 897 aaKnown RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 PIP5K1BO14986 540 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SMAD9O15198 467 aaKnown RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 KMOO15229 486 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 AKR7A2O43488 359 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 NPHS1O60500 1241 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 FKTNO75072 461 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 TADA2AO75478 443 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 CIB2O75838 187 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 DNAJB5O75953 348 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 CIAO1O76071 339 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 TOMM70O94826 608 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 CDK14O94921 469 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 TK1P04183 234 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 HMGN1P05114 100 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 CRYGCP07315 174 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 IGFBP1P08833 259 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ATF2P15336 505 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 YBX3P16989 372 aaKnown RBP eCLIP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 FUT4P22083 530 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 MAT2AP31153 395 aaKnown RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 GBP1P32455 592 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SLC15A1P46059 708 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 BAG6P46379 1132 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ALDH1A3P47895 512 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 LEPRP48357 1165 aaKnown RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 MTNR1BP49286 362 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 RGS19P49795 217 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SLC26A2P50443 739 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ARHGDIAP52565 204 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SLC7A2P52569 658 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 STX17P56962 302 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ACTR3P61158 418 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ACTR2P61160 394 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 PSMC5P62195 406 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SMAD3P84022 425 aaKnown RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 RELBQ01201 579 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 GOLGA8FQ08AF8 430 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 GOLGA8DPQ0D2H9 430 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 MYO1EQ12965 1108 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SCARF1Q14162 830 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 KARSQ15046 597 aaKnown RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 STILQ15468 1287 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 TRIP4Q15650 581 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 RAB30Q15771 203 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 GRIK4Q16099 956 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 NDUFA5Q16718 116 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 AOC3Q16853 763 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 KLHL38Q2WGJ6 581 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 GAB4Q2WGN9 574 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SPATS1Q496A3 300 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 BCL7AQ4VC05 210 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 PLEKHS1Q5SXH7 462 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ADGRF1Q5T601 910 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 STRIP1Q5VSL9 837 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 KCTD11Q693B1 232 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SPECC1LQ69YQ0 1117 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 CIAPIN1Q6FI81 312 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 KRT80Q6KB66 452 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 TMC5Q6UXY8 1006 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 PRR23CQ6ZRP0 262 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ZNF784Q8NCA9 323 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 TMIEQ8NEW7 156 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 IL31RAQ8NI17 732 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 EDAQ92838 391 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 LPPQ93052 612 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 KIAA1143Q96AT1 154 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 C14orf79Q96F83 325 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 METTL2AQ96IZ6 378 aaKnown RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 MAGED4Q96JG8 741 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SAMD8Q96LT4 415 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 NSMCE2Q96MF7 247 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ANKRD27Q96NW4 1050 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 GAL3ST4Q96RP7 486 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SEMA3CQ99985 751 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 GDF15Q99988 308 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 REEP2Q9BRK0 252 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 NUF2Q9BZD4 464 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 POLR1EQ9GZS1 481 aaKnown RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 RNF32Q9H0A6 362 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SLITRK6Q9H5Y7 841 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ZNF395Q9H8N7 513 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 PCDH9Q9HC56 1237 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SYTL2Q9HCH5 934 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 SEPSECSQ9HD40 501 aaKnown RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 CYP26B1Q9NR63 512 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 OXSMQ9NWU1 459 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ZSCAN32Q9NX65 697 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ZDHHC7Q9NXF8 308 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 MRPL39Q9NYK5 338 aaKnown RBP4.3□□□□□ -1.72
BRCA1-220ENST00000492859 ANAPC2Q9UJX6 822 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 HCN2Q9UL51 889 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 OGDHLQ9ULD0 1010 aa4.3□□□□□ -1.72
BRCA1-220ENST00000492859 HSF4Q9ULV5 492 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms