RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 CFHR1Q03591 330 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 ZNF177Q13360 481 aaPredicted RBP11.63□□□□□ -0.55
SNU13-208ENST00000488571 STIM1Q13586 685 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 TMEM259Q4ZIN3 620 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 OTUD1Q5VV17 481 aaPredicted RBP11.63□□□□□ -0.55
SNU13-208ENST00000488571 NEK5Q6P3R8 708 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 FOXR2Q6PJQ5 311 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 GCNT7Q6ZNI0 430 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 ABI3BPQ7Z7G0 1075 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 HORMAD1Q86X24 394 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 RNF34Q969K3 372 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 NAF1Q96HR8 494 aaKnown RBP11.63□□□□□ -0.55
SNU13-208ENST00000488571 APOLD1Q96LR9 279 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 TIGD1Q96MW7 591 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 ZNF578Q96N58 590 aaPredicted RBP11.63□□□□□ -0.55
SNU13-208ENST00000488571 PPP1R9BQ96SB3 815 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 UBE2TQ9NPD8 197 aaPredicted RBP11.63□□□□□ -0.55
SNU13-208ENST00000488571 ANLNQ9NQW6 1124 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 GPR27Q9NS67 375 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 MAN1B1Q9UKM7 699 aa11.63□□□□□ -0.55
SNU13-208ENST00000488571 RCCD1A6NED2 376 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 I6L893 689 aaPredicted RBP11.62□□□□□ -0.55
SNU13-208ENST00000488571 ERVH48-1M5A8F1 160 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 KPNA3O00505 521 aaPredicted RBP11.62□□□□□ -0.55
SNU13-208ENST00000488571 HSF2BPO75031 334 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 USP12O75317 370 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 AFPP02771 609 aaKnown RBP11.62□□□□□ -0.55
SNU13-208ENST00000488571 GP1BAP07359 652 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 HNRNPA2B1P22626 353 aaKnown RBP11.62□□□□□ -0.55
SNU13-208ENST00000488571 RRM1P23921 792 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 AKT2P31751 481 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 CHRNA3P32297 505 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 CDH4P55283 916 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 GABREP78334 506 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 ALFQ53S48 1182 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 ZNF542PQ5EBM4 170 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 ARTNQ5T4W7 220 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 SEL1L3Q68CR1 1132 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 KLHL10Q6JEL2 608 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 GJB7Q6PEY0 223 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 OLFML1Q6UWY5 402 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 FAM183BPQ6ZVS7 135 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 ZNF683Q8IZ20 524 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 CHST14Q8NCH0 376 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 TMIEQ8NEW7 156 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 NELFBQ8WX92 580 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 PPP1R13BQ96KQ4 1090 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 CALN1Q9BXU9 219 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 MUC3BQ9H195 1237 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 CPNE5Q9HCH3 593 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 ASCL3Q9NQ33 180 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 NLGN3Q9NZ94 848 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 VPS51Q9UID3 782 aa11.62□□□□□ -0.55
SNU13-208ENST00000488571 TRPM6Q9BX84 2022 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 A0A1W2PNU3 283 aaPredicted RBP11.61□□□□□ -0.55
SNU13-208ENST00000488571 K7ESM1 405 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 SCAMP1O15126 338 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 LZTS3O60299 673 aaPredicted RBP11.61□□□□□ -0.55
SNU13-208ENST00000488571 CSO75390 466 aaKnown RBP11.61□□□□□ -0.55
SNU13-208ENST00000488571 ZNF821O75541 412 aaPredicted RBP11.61□□□□□ -0.55
SNU13-208ENST00000488571 NEBLO76041 1014 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 ERBB2P04626 1255 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 TFE3P19532 575 aaPredicted RBP11.61□□□□□ -0.55
SNU13-208ENST00000488571 PPP1R2P41236 205 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 LSSP48449 732 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 ERVPABLB-1P60509 514 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 COPS2P61201 443 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 APBA1Q02410 837 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 NME3Q13232 169 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 FGL2Q14314 439 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 HS1BP3Q53T59 392 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 EFHC1Q5JVL4 640 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 OR6B2Q6IFH4 312 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 LINGO4Q6UY18 593 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 ERN2Q76MJ5 926 aaKnown RBP11.61□□□□□ -0.55
SNU13-208ENST00000488571 PASD1Q8IV76 773 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 LSMEM2Q8N112 164 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 FAM181AQ8N9Y4 354 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 ATP11CQ8NB49 1132 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 IFT43Q96FT9 208 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 BMFQ96LC9 184 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 DEPDC7Q96QD5 511 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 HDAC8Q9BY41 377 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 SEMA4CQ9C0C4 833 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 SIK2Q9H0K1 926 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 POLR1BQ9H9Y6 1135 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 PIGVQ9NUD9 493 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 PCDHGC3Q9UN70 934 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 CTNND2Q9UQB3 1225 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.61□□□□□ -0.55
SNU13-208ENST00000488571 WASF2Q9Y6W5 498 aa11.61□□□□□ -0.55
SNU13-208ENST00000488571 COL6A6A6NMZ7 2263 aa11.6□□□□□ -0.55
SNU13-208ENST00000488571 DOCK4Q8N1I0 1966 aa11.6□□□□□ -0.55
SNU13-208ENST00000488571 A0A0D9SEW6 157 aa11.6□□□□□ -0.55
SNU13-208ENST00000488571 BICDL2A1A5D9 508 aa11.6□□□□□ -0.55
SNU13-208ENST00000488571 POM121BA6NF01 834 aa11.6□□□□□ -0.55
SNU13-208ENST00000488571 A6NNZ2 444 aa11.6□□□□□ -0.55
SNU13-208ENST00000488571 M0QYT0 321 aa11.6□□□□□ -0.55
SNU13-208ENST00000488571 GPR37O15354 613 aa11.6□□□□□ -0.55
SNU13-208ENST00000488571 DAB1O75553 588 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms