RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TADA1Q96BN2 335 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 MCMBPQ9BTE3 642 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 FICDQ9BVA6 458 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 SP110Q9HB58 689 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 ATP13A1Q9HD20 1204 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 SLCO1B3Q9NPD5 702 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 VPS45Q9NRW7 570 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 KLF11O14901 512 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 NEBLO76041 1014 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 IL1BP01584 269 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 NMBRP28336 390 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 OR1E1P30953 314 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 SLC6A4P31645 630 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 MAGEA12P43365 314 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 SERPINB4P48594 390 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 SLC11A2P49281 568 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 SLC10A7Q0GE19 358 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 RNF43Q68DV7 783 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 FAM117BQ6P1L5 589 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 TRPM8Q7Z2W7 1104 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 CIR1Q86X95 450 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-225ENST00000483495 TCEAL8Q8IYN2 117 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 LGI2Q8N0V4 545 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 RBBP8Q99708 897 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 MANSC1Q9H8J5 431 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 PCMTD2Q9NV79 361 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 IL1RAPL1Q9NZN1 696 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 TXNDC16Q9P2K2 825 aa13.45□□□□□ -0.26
CPNE1-225ENST00000483495 PRAMEF11O60813 436 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 LILRB3O75022 631 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 SPRP35270 261 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 PPM1AP35813 382 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 LIMK2P53671 638 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 CSE1LP55060 971 aaKnown RBP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 WNT3AP56704 352 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 VEPH1Q14D04 833 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 PDPK2PQ6A1A2 396 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 OTOAQ7RTW8 1153 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 KCNMB4Q86W47 210 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 NSMCE1Q8WV22 266 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 PTPRN2Q92932 1015 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 ZNF599Q96NL3 588 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 FSD1LQ9BXM9 530 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 SLC13A1Q9BZW2 595 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 NACA2Q9H009 215 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 PDFQ9HBH1 243 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 NT5MQ9NPB1 228 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 STK39Q9UEW8 545 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 WDR91A4D1P6 747 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 H3BNC9 293 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 TPP1O14773 563 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 PMPCBO75439 489 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 STC2O76061 302 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 KLKB1P03952 638 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 MMP2P08253 660 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 RAG1P15918 1043 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 CDH4P55283 916 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 SF3A3Q12874 501 aaKnown RBP eCLIP13.44□□□□□ -0.262e-8■■■■□ 19.3
CPNE1-225ENST00000483495 PDE1CQ14123 709 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 HSP90AA5PQ58FG0 334 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 KYAT3Q6YP21 454 aaKnown RBP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 CNTN4Q8IWV2 1026 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 TMEM199Q8N511 208 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 CCDC63Q8NA47 563 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 ARRDC2Q8TBH0 407 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 PABPC5Q96DU9 382 aaKnown RBP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 ZNF778Q96MU6 729 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 KLHL5Q96PQ7 755 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 AGAP2Q99490 1192 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 MAGEH1Q9H213 219 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 ACTR5Q9H9F9 607 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 C20orf96Q9NUD7 363 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 NSMCE4AQ9NXX6 385 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 KLHL14Q9P2G3 628 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 UXTQ9UBK9 157 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-225ENST00000483495 TCAF1Q9Y4C2 921 aa13.44□□□□□ -0.26
CPNE1-225ENST00000483495 BIRC5O15392 142 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 FSBPO95073 299 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 ACVRL1P37023 503 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 CREMQ03060 361 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 TWF1Q12792 350 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 PLD1Q13393 1074 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 DBN1Q16643 649 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 INSCQ1MX18 579 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 SPRED3Q2MJR0 410 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 RABGAP1LQ5R372 815 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 TMCO4Q5TGY1 634 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 RFWD3Q6PCD5 774 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 DNAJB7Q7Z6W7 309 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-225ENST00000483495 STRA8Q7Z7C7 330 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 TRIM42Q8IWZ5 723 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 PPHLN1Q8NEY8 458 aaKnown RBP13.43□□□□□ -0.26
CPNE1-225ENST00000483495 RAB3IL1Q8TBN0 382 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 RNF38Q9H0F5 515 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 RXFP1Q9HBX9 757 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 MRPL17Q9NRX2 175 aaKnown RBP13.43□□□□□ -0.26
CPNE1-225ENST00000483495 TREX1Q9NSU2 369 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms