RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 DEPDC7Q96QD5 511 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 NPY6RQ99463 290 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 LGMNQ99538 433 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 C2orf49Q9BVC5 232 aaPredicted RBP13.08□□□□□ -0.32
TDP2-204ENST00000478507 CALN1Q9BXU9 219 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 HDAC8Q9BY41 377 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 POLR1BQ9H9Y6 1135 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 USP29Q9HBJ7 922 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 ARHGEF38Q9NXL2 777 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 ZNF212Q9UDV6 495 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 CTNND2Q9UQB3 1225 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.08□□□□□ -0.32
TDP2-204ENST00000478507 CHD5Q8TDI0 1954 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 MAST4O15021 2626 aa13.08□□□□□ -0.32
TDP2-204ENST00000478507 IGLV3-10A0A075B6K4 115 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 A0A0D9SEW6 157 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 BICDL2A1A5D9 508 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 DRGXA6NNA5 263 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 BNIP3LO60238 219 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 USP12O75317 370 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 CSO75390 466 aaKnown RBP13.07□□□□□ -0.32
TDP2-204ENST00000478507 ADCY5O95622 1261 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 PRNPP04156 253 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 NOS2P35228 1153 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 CXCR3P49682 368 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 TMPRSS3P57727 454 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 SKOR1P84550 965 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 APBA1Q02410 837 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 NME3Q13232 169 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 FZD2Q14332 565 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 PTPN20Q4JDL3 420 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 SMYD5Q6GMV2 418 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 C22orf39Q6P5X5 142 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 DPY19L3Q6ZPD9 716 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 Q6ZSR6 202 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 C11orf57Q6ZUT1 292 aaPredicted RBP13.07□□□□□ -0.32
TDP2-204ENST00000478507 ERN2Q76MJ5 926 aaKnown RBP13.07□□□□□ -0.32
TDP2-204ENST00000478507 SETD3Q86TU7 594 aaPredicted RBP13.07□□□□□ -0.32
TDP2-204ENST00000478507 LSMEM2Q8N112 164 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 ATP11CQ8NB49 1132 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 FAM174AQ8TBP5 190 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 PGAP3Q96FM1 320 aaPredicted RBP13.07□□□□□ -0.32
TDP2-204ENST00000478507 NAF1Q96HR8 494 aaKnown RBP13.07□□□□□ -0.32
TDP2-204ENST00000478507 MUC3BQ9H195 1237 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 CPNE5Q9HCH3 593 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 HOOK1Q9UJC3 728 aaKnown RBP13.07□□□□□ -0.32
TDP2-204ENST00000478507 WASF2Q9Y6W5 498 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 BOD1L1Q8NFC6 3051 aa13.07□□□□□ -0.32
TDP2-204ENST00000478507 PIEZO2Q9H5I5 2752 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 SPTY2D1-AS1A0A0U1RR47 76 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 POM121BA6NF01 834 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 A6NNZ2 444 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 M0QYT0 321 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 RAD51BO15315 384 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 ZMPSTE24O75844 475 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 NEBLO76041 1014 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 CSF2P04141 144 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 RHOCP08134 193 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 NME1P15531 152 aaKnown RBP13.06□□□□□ -0.32
TDP2-204ENST00000478507 UCNP55089 124 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 HNRNPKP61978 463 aaKnown RBP eCLIP13.06□□□□□ -0.32
TDP2-204ENST00000478507 KRT83P78385 493 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 RHDQ02161 417 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 ISXQ2M1V0 245 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 HS1BP3Q53T59 392 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 ZNF542PQ5EBM4 170 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 BRMS1LQ5PSV4 323 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 OR6B2Q6IFH4 312 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 LINGO4Q6UY18 593 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 KYAT3Q6YP21 454 aaKnown RBP13.06□□□□□ -0.32
TDP2-204ENST00000478507 DCP2Q8IU60 420 aaKnown RBP13.06□□□□□ -0.32
TDP2-204ENST00000478507 PASD1Q8IV76 773 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 C1orf131Q8NDD1 294 aaKnown RBP13.06□□□□□ -0.32
TDP2-204ENST00000478507 ZNF548Q8NEK5 533 aaPredicted RBP13.06□□□□□ -0.32
TDP2-204ENST00000478507 TTC9Q92623 222 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 VOPP1Q96AW1 172 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
TDP2-204ENST00000478507 CCDC114Q96M63 670 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 KLF6Q99612 283 aaPredicted RBP13.06□□□□□ -0.32
TDP2-204ENST00000478507 CRACR2AQ9BSW2 395 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 DUSP23Q9BVJ7 150 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 SRRTQ9BXP5 876 aaKnown RBP13.06□□□□□ -0.32
TDP2-204ENST00000478507 SEMA4CQ9C0C4 833 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 TKTL2Q9H0I9 626 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 SIK2Q9H0K1 926 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 APEX2Q9UBZ4 518 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 KLF15Q9UIH9 416 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 AJAP1Q9UKB5 411 aaPredicted RBP13.06□□□□□ -0.32
TDP2-204ENST00000478507 FARP1Q9Y4F1 1045 aaPredicted RBP13.06□□□□□ -0.32
TDP2-204ENST00000478507 SNX10Q9Y5X0 201 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 HS3ST3A1Q9Y663 406 aa13.06□□□□□ -0.32
TDP2-204ENST00000478507 GOLGA6L4A6NEF3 574 aa13.05□□□□□ -0.32
TDP2-204ENST00000478507 NEMP2A6NFY4 417 aa13.05□□□□□ -0.32
TDP2-204ENST00000478507 CAPN8A6NHC0 703 aa13.05□□□□□ -0.32
TDP2-204ENST00000478507 LEFTY1O75610 366 aa13.05□□□□□ -0.32
TDP2-204ENST00000478507 ALPPL2P10696 532 aa13.05□□□□□ -0.32
TDP2-204ENST00000478507 ADRB3P13945 408 aa13.05□□□□□ -0.32
TDP2-204ENST00000478507 SLC9A1P19634 815 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms