RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 TEAD2Q15562 447 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 DUSP6Q16828 381 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 OTOP3Q7RTS5 596 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 CARNMT1Q8N4J0 409 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 TDRD5Q8NAT2 981 aaKnown RBP14.87□□□□□ -0.03
HIF3A-206ENST00000472815 ADAMTS19Q8TE59 1207 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 FBF1Q8TES7 1133 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 DDI1Q8WTU0 396 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 MYEOVQ96EZ4 313 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 SPON2Q9BUD6 331 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 POLR1EQ9GZS1 481 aaKnown RBP14.87□□□□□ -0.03
HIF3A-206ENST00000472815 IL22Q9GZX6 179 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 SFXN1Q9H9B4 322 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 CASS4Q9NQ75 786 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 TDP1Q9NUW8 608 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 PSMC3IPQ9P2W1 217 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-206ENST00000472815 UBA2Q9UBT2 640 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-206ENST00000472815 SEPT3Q9UH03 358 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 LGALS13Q9UHV8 139 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 POC1B-GALNT4F8VUJ3 575 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 GREM1O60565 184 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 PEX11BO96011 259 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 POLBP06746 335 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 CES1P23141 567 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 ACVRL1P37023 503 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 CCR2P41597 374 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 SESN2P58004 480 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 MAGOHP61326 146 aaKnown RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 MTM1Q13496 603 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 SKIDA1Q1XH10 827 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 UBAP2Q5T6F2 1119 aaKnown RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 CYS1Q717R9 158 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 SH3RF2Q8TEC5 729 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 SMG7Q92540 1137 aaKnown RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 CDKL2Q92772 493 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 WBP2Q969T9 261 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 TIFAQ96CG3 184 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 TLCD1Q96CP7 247 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 XPO6Q96QU8 1125 aaKnown RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 TBL1YQ9BQ87 522 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 MLPHQ9BV36 600 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 CNOT10Q9H9A5 744 aaKnown RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 CERS4Q9HA82 394 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 SENP1Q9P0U3 644 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 TBC1D14Q9P2M4 693 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 RABGEF1Q9UJ41 708 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 ADAM21Q9UKJ8 722 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 MIA3Q5JRA6 1907 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 TCRBV9S1A1TA0A576 114 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 MSH2P43246 934 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 GABPB1Q06547 395 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 SLC10A7Q0GE19 358 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 FAM182AQ5T1J6 154 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 STXBP5Q5T5C0 1151 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 RNF219Q5W0B1 726 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 GRASPQ7Z6J2 395 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 MFN1Q8IWA4 741 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 OR52K1Q8NGK4 314 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 OTUB2Q96DC9 234 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 IMP4Q96G21 291 aaKnown RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 GORASP1Q9BQQ3 440 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 WDR83Q9BRX9 315 aaKnown RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 CINPQ9BW66 212 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 ACE2Q9BYF1 805 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 KIF9Q9HAQ2 790 aa14.86□□□□□ -0.03
HIF3A-206ENST00000472815 MRPS23Q9Y3D9 190 aaKnown RBP14.86□□□□□ -0.03
HIF3A-206ENST00000472815 TRANK1O15050 2925 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 A0A0D9SEW6 157 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 GFRA2O00451 464 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 SLC9A3R1O14745 358 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-206ENST00000472815 INHBAP08476 426 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 TCF3P15923 654 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 MGAT1P26572 445 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 HPDP32754 393 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-206ENST00000472815 GRIA1P42261 906 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 NRIP1P48552 1158 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 SGSHP51688 502 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 PPP2R2AP63151 447 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 ZXDBP98169 803 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 SPARCL1Q14515 664 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 PRSS36Q5K4E3 855 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 SPANXN3Q5MJ09 141 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 LGSNQ5TDP6 509 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 ZNF449Q6P9G9 518 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 KDM7AQ6ZMT4 941 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 METTL3Q86U44 580 aaKnown RBP14.85□□□□□ -0.03
HIF3A-206ENST00000472815 IGDCC3Q8IVU1 814 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 BBS7Q8IWZ6 715 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 SH2D3CQ8N5H7 860 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 KIAA1958Q8N8K9 716 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 IPMKQ8NFU5 416 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 OR7D4Q8NG98 312 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 TCEAL4Q96EI5 215 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 OXNAD1Q96HP4 312 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-206ENST00000472815 PDFQ9HBH1 243 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 UBP1Q9NZI7 540 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 MYO7AQ13402 2215 aa14.85□□□□□ -0.03
HIF3A-206ENST00000472815 CBX4O00257 560 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 PAPLNO95428 1278 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 MT-CYBP00156 380 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms