RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CLSTN1O94985 981 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 TRIM21P19474 475 aaKnown RBP11.98□□□□□ -0.49
VPS26A-204ENST00000467852 RNASE9P60153 205 aaKnown RBP11.98□□□□□ -0.49
VPS26A-204ENST00000467852 EIF2B5Q13144 721 aaKnown RBP11.98□□□□□ -0.49
VPS26A-204ENST00000467852 TRPC3Q13507 836 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 EFHC2Q5JST6 749 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 ATP1A1-AS1Q5TC04 95 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 PIK3R6Q5UE93 754 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 SLITRK4Q8IW52 837 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 PHACTR4Q8IZ21 702 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 SYCP3Q8IZU3 236 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 KYQ8NBH2 561 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 ASPSCR1Q9BZE9 553 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 TCEAL2Q9H3H9 227 aaPredicted RBP11.98□□□□□ -0.49
VPS26A-204ENST00000467852 PDRG1Q9NUG6 133 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 NAALADL1Q9UQQ1 740 aa11.98□□□□□ -0.49
VPS26A-204ENST00000467852 LOC101059948A0A1B0GTJ6 334 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 ZNF233A6NK53 670 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 BHMG1C9JSJ3 638 aaPredicted RBP11.97□□□□□ -0.49
VPS26A-204ENST00000467852 FPGTO14772 594 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 HGSO14964 777 aaPredicted RBP11.97□□□□□ -0.49
VPS26A-204ENST00000467852 PDGFAP04085 211 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 FGF3P11487 239 aaPredicted RBP11.97□□□□□ -0.49
VPS26A-204ENST00000467852 VAV1P15498 845 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 TSHRP16473 764 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 TNNI1P19237 187 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 PRPHP41219 470 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 KCNA1Q09470 495 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 CDH18Q13634 790 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 ELOAQ14241 798 aaKnown RBP11.97□□□□□ -0.49
VPS26A-204ENST00000467852 NR6A1Q15406 480 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 IL17AQ16552 155 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 FAXCQ5TGI0 409 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 RFWD3Q6PCD5 774 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 LVRNQ6Q4G3 990 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 NLGN4XQ8N0W4 816 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 CARNMT1Q8N4J0 409 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 NLGN4YQ8NFZ3 816 aaPredicted RBP11.97□□□□□ -0.49
VPS26A-204ENST00000467852 SYAP1Q96A49 352 aaPredicted RBP11.97□□□□□ -0.49
VPS26A-204ENST00000467852 LRRC61Q9BV99 259 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 DDA1Q9BW61 102 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 SLC17A9Q9BYT1 436 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 CLPBQ9H078 707 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 SEMA6CQ9H3T2 930 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 SMYD3Q9H7B4 428 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 SLAMF7Q9NQ25 335 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 FAM49BQ9NUQ9 324 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.97□□□□□ -0.49
VPS26A-204ENST00000467852 RRN3Q9NYV6 651 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 KCND3Q9UK17 655 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 HBS1LQ9Y450 684 aaKnown RBP11.97□□□□□ -0.49
VPS26A-204ENST00000467852 B3GALT1Q9Y5Z6 326 aa11.97□□□□□ -0.49
VPS26A-204ENST00000467852 DCHS2Q6V1P9 2916 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 IRAK2O43187 625 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 SPINT1O43278 529 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 KIF20AO95235 890 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.49
VPS26A-204ENST00000467852 PAK4O96013 591 aaPredicted RBP11.96□□□□□ -0.49
VPS26A-204ENST00000467852 ITGA3P26006 1051 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 ATICP31939 592 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 PTGER4P35408 488 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 HDAC4P56524 1084 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 PER3P56645 1201 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 GUCY1B3Q02153 619 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 ELOCQ15369 112 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 ARHGAP44Q17R89 818 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 SMTNL2Q2TAL5 461 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 MAP9Q49MG5 647 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 TMEM119Q4V9L6 283 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 L1TD1Q5T7N2 865 aaKnown RBP11.96□□□□□ -0.49
VPS26A-204ENST00000467852 PIP5KL1Q5T9C9 394 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 SEL1L3Q68CR1 1132 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 KDELC2Q7Z4H8 507 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 PIM3Q86V86 326 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 UNC5BQ8IZJ1 945 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 CRYBG2Q8N1P7 616 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 FSTL5Q8N475 847 aaPredicted RBP11.96□□□□□ -0.49
VPS26A-204ENST00000467852 PMEPA1Q969W9 287 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 CBWD1Q9BRT8 395 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 FOXP1Q9H334 677 aaPredicted RBP11.96□□□□□ -0.49
VPS26A-204ENST00000467852 OLA1Q9NTK5 396 aaKnown RBP11.96□□□□□ -0.49
VPS26A-204ENST00000467852 APPL1Q9UKG1 709 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 PILRAQ9UKJ1 303 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 GPR34Q9UPC5 381 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 ZFR2Q9UPR6 939 aaKnown RBP11.96□□□□□ -0.49
VPS26A-204ENST00000467852 POLHQ9Y253 713 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 ADGRG1Q9Y653 693 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 USP3Q9Y6I4 520 aa11.96□□□□□ -0.49
VPS26A-204ENST00000467852 RTTNQ86VV8 2226 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 SMAPO00193 183 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 KIAA0391O15091 583 aaKnown RBP11.95□□□□□ -0.5
VPS26A-204ENST00000467852 ALOX15BO15296 676 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 STX6O43752 255 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 LUC7L3O95232 432 aaKnown RBP11.95□□□□□ -0.5
VPS26A-204ENST00000467852 CBX6O95503 412 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 ALPIP09923 528 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 CD1EP15812 388 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 PNLIPP16233 465 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 STK19P49842 368 aaPredicted RBP11.95□□□□□ -0.5
VPS26A-204ENST00000467852 NDST1P52848 882 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms