RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 APOA4P06727 396 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 ADRB2P07550 413 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 PRR35P0CG20 571 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 TFEBP19484 476 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 PSMA4P25789 261 aaKnown RBP4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 UBA7P41226 1012 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 MC1RQ01726 317 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 CREB5Q02930 508 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 CALD1Q05682 793 aaKnown RBP4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 CDK18Q07002 472 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 CDC16Q13042 620 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 CHAF1BQ13112 559 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 PGM5Q15124 567 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 NFIL3Q16649 462 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 CCDC142Q17RM4 750 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 PRICKLE4Q2TBC4 344 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 ANXA2RQ3ZCQ2 193 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 KIAA1755Q5JYT7 1200 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 ZKSCAN2Q63HK3 967 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 KLHL24Q6TFL4 600 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 DHRS13Q6UX07 377 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 CREBRFQ8IUR6 639 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 NFKBIDQ8NI38 313 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 ATP6V1E2Q96A05 226 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 RBM17Q96I25 401 aaKnown RBP4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 SIGLEC11Q96RL6 698 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 USP44Q9H0E7 712 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 SLC25A18Q9H1K4 315 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 RMI1Q9H9A7 625 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 BRF2Q9HAW0 419 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 SEPT11Q9NVA2 429 aaKnown RBP4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 TAS2R10Q9NYW0 307 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 CNOT7Q9UIV1 285 aaKnown RBP4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 RPS6KA6Q9UK32 745 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 BAG5Q9UL15 447 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 PCDHGB4Q9UN71 923 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 DTX4Q9Y2E6 619 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 PKP3Q9Y446 797 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 PSAT1Q9Y617 370 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 COL3A1P02461 1466 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 BICDL2A1A5D9 508 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 KCNJ18B7U540 433 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 H7C0S8 307 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 PEX12O00623 359 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 SEPT4O43236 478 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 GUCY1B2O75343 617 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 TSPAN9O75954 239 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 CTSAP10619 480 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 LYL1P12980 280 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 IL11P20809 199 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 EPHA8P29322 1005 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 OAS2P29728 719 aaKnown RBP4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 AVPR2P30518 371 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 CTNNA1P35221 906 aaKnown RBP4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 PNPLA4P41247 253 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 ARHGAP25P42331 645 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 NLRP5P59047 1200 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 THOC5Q13769 683 aaKnown RBP4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 CAMK1Q14012 370 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 LIPMQ5VYY2 423 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 INO80CQ6PI98 192 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 SLC22A25Q6T423 547 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 SYNE3Q6ZMZ3 975 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 ANKRD44Q8N8A2 993 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 ARL14EPQ8N8R7 260 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 FSIP1Q8NA03 581 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 LINS1Q8NG48 757 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 FAM110DQ8TAY7 271 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 METTL6Q8TCB7 284 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 USP6NLQ92738 828 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 FAM120BQ96EK7 910 aaKnown RBP4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 YME1L1Q96TA2 773 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 PIMREGQ9BSJ6 248 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 MXD3Q9BW11 206 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 PHF7Q9BWX1 381 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 MOV10Q9HCE1 1003 aaKnown RBP4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 TMEM5Q9Y2B1 443 aa4.78□□□□□ -1.64
HMGB1P48-201ENST00000446155 CACNA1IQ9P0X4 2223 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 PASKQ96RG2 1323 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 AGAP14A8MT82 685 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 C17orf100A8MU93 164 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 TNPO2O14787 897 aaKnown RBP4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 TSPAN4O14817 238 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 USP12O75317 370 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 GJB3O75712 270 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 CSH1P0DML2 217 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 CSH2P0DML3 217 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 KELP23276 732 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 RGS2P41220 211 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 HARS2P49590 506 aaKnown RBP4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 SLC12A2P55011 1212 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 SNX16P57768 344 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 RPS3AP61247 264 aaKnown RBP4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 IFI35P80217 286 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 GHRHRQ02643 423 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZBTB16Q05516 673 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 RASA2Q15283 850 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 HECTD3Q5T447 861 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 MORN5Q5VZ52 161 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZNF626Q68DY1 528 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms