RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ADA2Q9NZK5 511 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 DNAJC16Q9Y2G8 782 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 ATAD5Q96QE3 1844 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 NRP1O14786 923 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 SUPT7LO94864 414 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 SCNN1AP37088 669 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 NEPROQ6NW34 567 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 LRRC49Q8IUZ0 686 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 CFAP52Q8N1V2 620 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 TMEM174Q8WUU8 243 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 SUSD3Q96L08 255 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 QKIQ96PU8 341 aaKnown RBP eCLIP11.75□□□□□ -0.534e-7■■□□□ 13.8
TRAPPC9-202ENST00000438773 SEMA3CQ99985 751 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 CENPKQ9BS16 269 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 CIPCQ9C0C6 399 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 FBXW11Q9UKB1 542 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 FZD10Q9ULW2 581 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 EP400Q96L91 3159 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 ALADP13716 330 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 SMARCB1Q12824 385 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 IRF5Q13568 498 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 MFSD5Q6N075 450 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 ZCCHC23Q6ZST2 131 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 TPGS1Q6ZTW0 290 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 OTOP2Q7RTS6 562 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 BTN2A3PQ96KV6 586 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 RXFP1Q9HBX9 757 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 CRTAC1Q9NQ79 661 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 SYBUQ9NX95 663 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 VPS9D1Q9Y2B5 631 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 TTC36A6NLP5 189 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 TMEM63AO94886 807 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 SPATA31D3P0C874 917 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 CYBAP13498 195 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 SERPINH1P50454 418 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 AQP5P55064 265 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PHEXP78562 749 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 CCDC142Q17RM4 750 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PCID2Q5JVF3 399 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 SPATA31D4Q6ZUB0 917 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 SMOQ99835 787 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PCDHA11Q9Y5I1 949 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 A0A1W2PQ45 241 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 A0A1W2PQY0 241 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PHGDHO43175 533 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 CHRNA1P02708 482 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 FAM163BP0C2L3 166 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 GRK2P25098 689 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 RGS4P49798 205 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 CSE1LP55060 971 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 IMPG1Q17R60 797 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 FBXO46Q6PJ61 603 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PRSS55Q6UWB4 352 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 FIBCD1Q8N539 461 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 EXOC2Q96KP1 924 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 MYLK2Q9H1R3 596 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 SPG21Q9NZD8 308 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 COL11A2P13942 1736 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 ADAMTSL1Q8N6G6 1762 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 AIM2O14862 343 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 GLUD2P49448 558 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 RBBP7Q16576 425 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PPM1LQ5SGD2 360 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PRPF39Q86UA1 669 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 AGGF1Q8N302 714 aaeCLIP11.74□□□□□ -0.532e-7■■■■■ 55.9
TRAPPC9-202ENST00000438773 EMILIN2Q9BXX0 1053 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 CD274Q9NZQ7 290 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 DPP7Q9UHL4 492 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 TRMT6Q9UJA5 497 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PACSIN3Q9UKS6 424 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 RAD54BQ9Y620 910 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 HNRNPCL1O60812 293 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PARNO95453 639 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 OASLQ15646 514 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 CERCAMQ5T4B2 595 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 ASRGL1Q7L266 308 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 MFN1Q8IWA4 741 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 ZNF567Q8N184 647 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 FUBP3Q96I24 572 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PEBP4Q96S96 227 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 TMPRSS4Q9NRS4 437 aa11.74□□□□□ -0.53
TRAPPC9-202ENST00000438773 PTGESO14684 152 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 ENTPD5O75356 428 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 KLHL2O95198 593 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 PIRTP0C851 137 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 SERPINB3P29508 390 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 GABRB2P47870 512 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 WNT3AP56704 352 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 PDCD2Q16342 344 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 SCARA3Q6AZY7 606 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 OTOP3Q7RTS5 596 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 PAAF1Q9BRP4 392 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 TMEM109Q9BVC6 243 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 GLOD4Q9HC38 313 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 COL4A5P29400 1685 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 E9PAM4 449 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 TPP1O14773 563 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 SMNDC1O75940 238 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 CCL5P13501 91 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 ENO3P13929 434 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms