RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 BAP1Q92560 729 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 FGF11Q92914 225 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 HIC2Q96JB3 615 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 C1orf74Q96LT6 269 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 CCDC114Q96M63 670 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 CEP44Q9C0F1 390 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 WDCPQ9H6R7 721 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 CAAP1Q9H8G2 361 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 FZD3Q9NPG1 666 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 PLCB1Q9NQ66 1216 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 TMEM51Q9NW97 253 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 STAP1Q9ULZ2 295 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 RAI2Q9Y5P3 530 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 SNX10Q9Y5X0 201 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 AK5Q9Y6K8 562 aa11.2□□□□□ -0.62
SPTLC1P4-201ENST00000435997 CXorf51AA0A1B0GTR3 108 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 FOXN3O00409 490 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 KPNA3O00505 521 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 MT-CO3P00414 261 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 GP1BAP07359 652 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 ZNF18P17022 549 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 ITGB7P26010 798 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 FLT3P36888 993 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 USP8P40818 1118 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 SULT1E1P49888 294 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 SERPINH1P50454 418 aaKnown RBP11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 SNX16P57768 344 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 ARF5P84085 180 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 CCDC15Q0P6D6 951 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 SLC25A52Q3SY17 297 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 PCSK4Q6UW60 755 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 LINGO4Q6UY18 593 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 DPY19L3Q6ZPD9 716 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 ERN2Q76MJ5 926 aaKnown RBP11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 ARCQ7LC44 396 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 TFAP2DQ7Z6R9 452 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 XYLT1Q86Y38 959 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 LSM14AQ8ND56 463 aaKnown RBP11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 FAM174AQ8TBP5 190 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 GRIN3AQ8TCU5 1115 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 FCRL3Q96P31 734 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 TBCBQ99426 244 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 MYOCQ99972 504 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 SIK2Q9H0K1 926 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 TMPRSS4Q9NRS4 437 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 NLGN3Q9NZ94 848 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 MPP6Q9NZW5 540 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 KIAA1468Q9P260 1216 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 IL36AQ9UHA7 158 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 DNAJC12Q9UKB3 198 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 PCDHB1Q9Y5F3 818 aa11.19□□□□□ -0.62
SPTLC1P4-201ENST00000435997 ILVBLA1L0T0 632 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 A6NNZ2 444 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 RRP8O43159 456 aaKnown RBP11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 AP1G1O43747 822 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 BNIP3LO60238 219 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 LEFTY1O75610 366 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 CD160O95971 181 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 F9P00740 461 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 ADRB3P13945 408 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 NME1P15531 152 aaKnown RBP11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 CYP11B1P15538 503 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 KRT9P35527 623 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 ACTN2P35609 894 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 NEK3P51956 506 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 CLDN2P57739 230 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 FZD2Q14332 565 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 BECN1Q14457 450 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 ARSIQ5FYB1 569 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 MIIPQ5JXC2 388 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 MANEALQ5VSG8 457 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 KIAA1161Q6NSJ0 714 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 LRRC69Q6ZNQ3 347 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 ZSCAN30Q86W11 494 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 SPACA3Q8IXA5 215 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 PCDH20Q8N6Y1 951 aaKnown RBP11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 OR7D4Q8NG98 312 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 PPP1R16AQ96I34 528 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 BMFQ96LC9 184 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 APOLD1Q96LR9 279 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 HAPLN3Q96S86 360 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 KLF6Q99612 283 aaPredicted RBP11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 TNKS2Q9H2K2 1166 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 SYNCQ9H7C4 482 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 USP29Q9HBJ7 922 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 TMEM59LQ9UK28 342 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 NEU3Q9UQ49 428 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 PAXBP1Q9Y5B6 917 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 FADS3Q9Y5Q0 445 aa11.18□□□□□ -0.62
SPTLC1P4-201ENST00000435997 TEX51A0A1B0GUA7 166 aa11.17□□□□□ -0.62
SPTLC1P4-201ENST00000435997 K7ESM1 405 aa11.17□□□□□ -0.62
SPTLC1P4-201ENST00000435997 SCAMP1O15126 338 aa11.17□□□□□ -0.62
SPTLC1P4-201ENST00000435997 RAD51BO15315 384 aa11.17□□□□□ -0.62
SPTLC1P4-201ENST00000435997 FFAR2O15552 330 aa11.17□□□□□ -0.62
SPTLC1P4-201ENST00000435997 SPINT1O43278 529 aa11.17□□□□□ -0.62
SPTLC1P4-201ENST00000435997 OPA1O60313 960 aa11.17□□□□□ -0.62
SPTLC1P4-201ENST00000435997 LSM8O95777 96 aaKnown RBP11.17□□□□□ -0.62
SPTLC1P4-201ENST00000435997 CSF2P04141 144 aa11.17□□□□□ -0.62
SPTLC1P4-201ENST00000435997 PRB1P04280 392 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms