RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 C1SP09871 688 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 RECQLP46063 649 aaPredicted RBP22.27■■□□□ 1.16
ACTB-203ENST00000417101 COL28A1Q2UY09 1125 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 CT47A1Q5JQC4 288 aaPredicted RBP22.27■■□□□ 1.16
ACTB-203ENST00000417101 NEK5Q6P3R8 708 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 DPY19L3Q6ZPD9 716 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 HORMAD1Q86X24 394 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 DRC7Q8IY82 874 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 TSC1Q92574 1164 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 ZYG11BQ9C0D3 744 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 VPS16Q9H269 839 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 GANQ9H2C0 597 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 FZD3Q9NPG1 666 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 ZNF212Q9UDV6 495 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 IL36AQ9UHA7 158 aa22.27■■□□□ 1.16
ACTB-203ENST00000417101 NOCTQ9UK39 431 aaKnown RBP22.27■■□□□ 1.16
ACTB-203ENST00000417101 URB1O60287 2271 aaKnown RBP22.27■■□□□ 1.16
ACTB-203ENST00000417101 ZMPSTE24O75844 475 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 PCDH8O95206 1070 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 CDK4P11802 303 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 JUPP14923 745 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 KLK7P49862 253 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 ZNF284Q2VY69 593 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 RETSATQ6NUM9 610 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 ZNF783Q6ZMS7 281 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 ERN2Q76MJ5 926 aaKnown RBP22.26■■□□□ 1.15
ACTB-203ENST00000417101 ARCQ7LC44 396 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 PHLDB2Q86SQ0 1253 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 ZNF677Q86XU0 584 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 TMEM145Q8NBT3 493 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 HNRNPLLQ8WVV9 542 aaKnown RBP22.26■■□□□ 1.15
ACTB-203ENST00000417101 ATP13A1Q9HD20 1204 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 LOC400499M0QZD8 3231 aa22.26■■□□□ 1.15
ACTB-203ENST00000417101 ZNF821O75541 412 aaPredicted RBP22.25■■□□□ 1.15
ACTB-203ENST00000417101 LEFTY1O75610 366 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 THEGLP0DJG4 465 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 AKT2P31751 481 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 HNF1BP35680 557 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 SERPINH1P50454 418 aaKnown RBP22.25■■□□□ 1.15
ACTB-203ENST00000417101 DNA2P51530 1060 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 POLR2FP61218 127 aaKnown RBP22.25■■□□□ 1.15
ACTB-203ENST00000417101 GNA12Q03113 381 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 SLC20A2Q08357 652 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 CDO1Q16878 200 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 RAB6CQ53S08 254 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 PPP1R16AQ96I34 528 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 HDAC8Q9BY41 377 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 RAB6CQ9H0N0 254 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 FAM207AQ9NSI2 230 aaPredicted RBP22.25■■□□□ 1.15
ACTB-203ENST00000417101 ZFR2Q9UPR6 939 aaKnown RBP22.25■■□□□ 1.15
ACTB-203ENST00000417101 WASF2Q9Y6W5 498 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 ADAMTS20P59510 1910 aa22.25■■□□□ 1.15
ACTB-203ENST00000417101 ARID1BQ8NFD5 2236 aaPredicted RBP22.25■■□□□ 1.15
ACTB-203ENST00000417101 CYP1A1P04798 512 aaPredicted RBP22.24■■□□□ 1.15
ACTB-203ENST00000417101 CKMT2P17540 419 aa22.24■■□□□ 1.15
ACTB-203ENST00000417101 CHRNB2P17787 502 aa22.24■■□□□ 1.15
ACTB-203ENST00000417101 MMP8P22894 467 aa22.24■■□□□ 1.15
ACTB-203ENST00000417101 CDR2Q01850 454 aa22.24■■□□□ 1.15
ACTB-203ENST00000417101 KRT31Q15323 416 aa22.24■■□□□ 1.15
ACTB-203ENST00000417101 C15orf59Q2T9L4 293 aaPredicted RBP22.24■■□□□ 1.15
ACTB-203ENST00000417101 SEL1L3Q68CR1 1132 aa22.24■■□□□ 1.15
ACTB-203ENST00000417101 SLC30A5Q8TAD4 765 aa22.24■■□□□ 1.15
ACTB-203ENST00000417101 ENOX1Q8TC92 643 aaKnown RBP22.24■■□□□ 1.15
ACTB-203ENST00000417101 RXFP2Q8WXD0 754 aa22.24■■□□□ 1.15
ACTB-203ENST00000417101 CEP44Q9C0F1 390 aa22.24■■□□□ 1.15
ACTB-203ENST00000417101 NLRC4Q9NPP4 1024 aa22.24■■□□□ 1.15
ACTB-203ENST00000417101 PPARGC1AQ9UBK2 798 aaKnown RBP22.24■■□□□ 1.15
ACTB-203ENST00000417101 HNRNPA2B1P22626 353 aaKnown RBP22.23■■□□□ 1.15
ACTB-203ENST00000417101 ADRA1BP35368 520 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 SOX5P35711 763 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 ACVRL1P37023 503 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 CLDN2P57739 230 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 ARF5P84085 180 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 FMO1Q01740 532 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 HES3Q5TGS1 186 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 CDKAL1Q5VV42 579 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 PDZD3Q86UT5 571 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 SLC25A45Q8N413 288 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 PCDH20Q8N6Y1 951 aaKnown RBP22.23■■□□□ 1.15
ACTB-203ENST00000417101 OR13H1Q8NG92 308 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 C11orf70Q9BRQ4 267 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 CALN1Q9BXU9 219 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 KLHL11Q9NVR0 708 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 OR12D3Q9UGF7 316 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 FCF1Q9Y324 198 aaKnown RBP22.23■■□□□ 1.15
ACTB-203ENST00000417101 ACTL7AQ9Y615 435 aa22.23■■□□□ 1.15
ACTB-203ENST00000417101 DOCK4Q8N1I0 1966 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 TRIM38O00635 465 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 EPHB6O15197 1021 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 SIGLEC6O43699 453 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 GJB6O95452 261 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 TPM2P07951 284 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 SDC4P31431 198 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 CCNHP51946 323 aaPredicted RBP22.22■■□□□ 1.15
ACTB-203ENST00000417101 NEK3P51956 506 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 JAM2P57087 298 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 TARDBPQ13148 414 aaKnown RBP eCLIP22.22■■□□□ 1.15
ACTB-203ENST00000417101 ILKQ13418 452 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 ARL13BQ3SXY8 428 aa22.22■■□□□ 1.15
ACTB-203ENST00000417101 CCDC14Q49A88 953 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms